Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0263 ATGGGATTCTCTGTGTTGCCAAAAGCAACTCCTTGCATTTTGTTCCTGGCTCTGCTGTCTTGTACTTGCTTTACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATCACTATCAAATGGGATATTATAAGCTGGACCCCTGATGGATATGTGGCTGTTGTTACAATGAACAACTTCCAACAATATCGTCATATTGCTTCACCCGGGTGGTCACTGGGATGGACATGGGCGAAAAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACCGAACAAGGAGATTGTTCAAAATTTAAGGGAGGTATTCCACATTGCTGTAAGAAAGATCCGACGGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGTGGAGTGCTCAGTTCATGGGCTCAGGATCCAACCAACGCAGTTTCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAAAACTGTCAAAGTTCCTAAAAATTTCACCTTGAAAGCACCAGGACCAGGTTATACTTGTAGTCCAGCAAAGATTGTGAGACCCACTCAATTCATTCAAGCAGACAAAAGGAGAGTGACACAAGCACTGATGACATGGAATGTGACATGTACATACTCACAATTTCTGGCTCAGAAAACTCCCTCTTGCTGTGTCTCACTTTCATCTTTTTATAATGAGACCATTGTTCCCTGCCCAACATGTGCATGTGGCTGCCAAACTAACGCATCTAAGTCAGGGACCTGTGTAGATCGAGATGCACCGCATTTGGCATCAGTTGTTTCTGGCTCTGGGAAGAATAACCTGTCACCTTTGGTTCAATGTACTAGTCATATGTGCCCAGTCCGTATACACTGGCATGTTAAGGTTAACTACAAGGAATACTGGCGTGTGAAGGTTACTATTACTAATTTTAATTACAGGATGAATTATTCTGAGTGGAACATGGTTGTTCAACATCCAAACTTTGACAATCTGACTCAGTTGTTCAGTTTCAACTACAAGTCACTGACTCCTTATGGTTCAATAAATGATACTGCAATGCTATGGGGAGTTAAGTTCTATAATGATTTTCTCAACCAAGCTGGCCCTAATGGCAATGTTCAATCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGATCTACTTCAACGGTGACAACTGTGTAATGCCACCACCCGATTCTTATCCCTGGTTACCTAATGCTGGTGCTCGGCAAGAGGTTTCCTTGTTTGCTTTAGTGATAACATCTTTGGTAGCCTTGGTATTTTATGCTCACGCATAA 1347 0.4254 MGFSVLPKATPCILFLALLSCTCFTSTDAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIASPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGGIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVSSFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCSPAKIVRPTQFIQADKRRVTQALMTWNVTCTYSQFLAQKTPSCCVSLSSFYNETIVPCPTCACGCQTNASKSGTCVDRDAPHLASVVSGSGKNNLSPLVQCTSHMCPVRIHWHVKVNYKEYWRVKVTITNFNYRMNYSEWNMVVQHPNFDNLTQLFSFNYKSLTPYGSINDTAMLWGVKFYNDFLNQAGPNGNVQSELLFRKDKATFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNAGARQEVSLFALVITSLVALVFYAHA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0263 448 PANTHER COBRA-LIKE PROTEIN 7 447 - -
Aed3g0263 448 PANTHER PROTEIN COBRA 7 447 IPR006918 GO:0010215|GO:0031225
Aed3g0263 448 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
Aed3g0263 448 PIRSF COBRA 3 448 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0263 Aed-Chr3 1973462 1977320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0263 13 443 COBRA Gene Family AT3G02210 76.674 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0263 - - gmx:100783820 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0263 3 1973462 1977320 Aed3g0263 3 1973462 1977320 ECH
Aed3g0263 3 1973462 1977320 Aed3g0989 3 7420781 7423924 ECH