Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0262 ATGCCACTTCAAACACAACGGTTGACGTGTTATGTTCACTCATATGCTATTTATCAACTTATCATAGTTGATAACATCATTGAGGGAATGAGGCTTGTCATATCAGCTGTATGTGTTATTGTGCTATTCTCTTATGCAGCCGCGTATGATCCTTTGGATCCAAATGGAAACGTAACGCTCAAATGGGATATTGTGTCATGGACAGCAGATGGCTATGTAGCAGTGGTAACAATGAGCAATTTCCAAATGTTTCGGCACATCATGAATCCTGGATGGACCTTGGGATGGACATGGGCAAAGAAGGAAGTTATATGGTCCATGGTAGGAGCTCAAACCACAGAACAAGGAGACTGTTCTAAGTTCAAAGGCAATGTACCTCACTGCTGCAAGAAAACTCCCACAGTTGTAGACTTGCTCCCTGGTGTGCCTTACAACCAGCAATTCACAAACTGTTGTAAGGGTGGAGTGGTGGCAGCATGGGGCCAAGACCCTTCATCAGCAGTCTCATCCTTCCAAGTGAGTATTGGGCTAGCTGGTACTACAAACAAGACTGTTAAGCTCCCTCAGAACTTCACTCTCTTGGGTCCAGGACCAGGATACACTTGTGGCCCTGCCAAGGTTGTTCCTTCCACTGTTTTCCTTACACCTGACAAGCGCCGCAAGACTCAAGCACTGATGACATGGAATGTTACTTGCACATACTCACAATTTCTGGCCAGAAAGAACCCGGGTTGCTGTGTATCTTTGTCATCTTTCTACAATGAGACCATTACCCCTTGTCCCACCTGTGCCTGTGGCTGCCAGAACAAGAGGAACTGTGTCAAGAGTGACTCTAAACGTATAAACATGGTGGGGATTCACACTCCAAAGAAAGACAACGAACCATTACTACAGTGCACTCATCATATGTGCCCAATAAGAGTACACTGGCACGTGAAGCTCAACTATAAGGACTATTGGCGAGTCAAGATTGCCGTAACAAATTTCAATTACAGGATGAATTACTCCCTCTGGACTCTTGCTGTTCAGCATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTACTTCCCTATGAGTCCATAAATGACACTGGTATGTTCTATGGCATGAAATACTTTAATGATCTCTTAATGGAAGCTGGACCAACTGGGAATATTCAATCAGAAATTCTTCTTCAGAAGAACCAGGAAACATTCACATTCAAGCAGGGGTGGGCATTTCCTCGCAAGGTCTACTTTAACGGTGAAGAATGCATGCTGCCACCACCGGATAGCTACCCGATCCTCCCTAATTCTGCCCCTGTGAACCTATTAAACTTCCCGACATTCATCTTCACAATGCTTGTCATGCTAGCTGTTTGGTGA 1383 0.4454 MPLQTQRLTCYVHSYAIYQLIIVDNIIEGMRLVISAVCVIVLFSYAAAYDPLDPNGNVTLKWDIVSWTADGYVAVVTMSNFQMFRHIMNPGWTLGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPSSAVSSFQVSIGLAGTTNKTVKLPQNFTLLGPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNVTCTYSQFLARKNPGCCVSLSSFYNETITPCPTCACGCQNKRNCVKSDSKRINMVGIHTPKKDNEPLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAVTNFNYRMNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYESINDTGMFYGMKYFNDLLMEAGPTGNIQSEILLQKNQETFTFKQGWAFPRKVYFNGEECMLPPPDSYPILPNSAPVNLLNFPTFIFTMLVMLAVW 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0262 460 PIRSF COBRA 20 460 IPR006918 GO:0010215|GO:0031225
Aed3g0262 460 PANTHER PROTEIN COBRA 33 458 IPR006918 GO:0010215|GO:0031225
Aed3g0262 460 PANTHER COBRA-LIKE PROTEIN 33 458 - -
Aed3g0262 460 Pfam COBRA-like protein 72 235 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0262 Aed-Chr3 1971292 1974698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0262 48 459 COBRA Gene Family AT3G29810 66.505 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0262 - - gmx:100784352 902.894