Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0260 ATGGCTTTGTTCATGGCAATTATTGGTGTTGTTGTCTTGGTGCTCTGTTTTTGCTCTGCTCTCTTGAAGTGGAATGAAGTGAGGTACAGGAGGAAAGGTTTGCCTCAAGGCACAATGGGGTGGCCTGTTTTTGGAGAGACAACTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAGAACAAGAGGGCAAGGTATGGCAGTTTTTTCAAATCCCACATATTGGGGTGTCCTACCATTGTATCCATGGATCCGGAGCTGAATAGATACATACTGATGAATGAAGCAAAAGGGCTTGTTCCTGGGTACCCACAATCCATGTTAGATATCTTAGGCAAACGCAATATTGCAGCTGTTCATGGCTCCACTCACAAGTACATGAGAGGAGCACTGCTTTCCATCATTAGCCCCACCTTGATCAGACTTCAGCTTTTACCTAAAATTGATCAGTTCATGAGAACCCACTTGAGTCATTGGGACAACAAACTCATAAACATTCAAGAGAAAACTAAAGAGATGGCATTTCTCTCTTCCCTGAAGCAGATTGCTGGCATGGAATCCAGCTCAATATCTCAACCCTTCATGACAGAGTTCTTCAAACTAGTTTTAGGAACTCTCTCTTTGCCTATTAACCTTCCTGGCACAAATTATCGCCAATCAATTTTTAACAAGGCAAGAAAAAGTATTATCAGCATTCTTAGTCAGCTGCTAGAGGAAAGGAAAGCATCACAAAAAGCCTACGGGGACATGCTTGGTTGCTTGATGAATAGAGATGAAAATCGATACAAACTAACTGATGAGGAAATCATTGATCTTATTATTACAATTATGTATTCTGGTTATGAAACTGTTTCAACTACATCAATGATGGCAGTGAAGTACCTCCATGACCATCCCAAAGTTCTTGAAGAAATCAGAAAAGAGCATTTTGCCATAAGGGAAAGGAAAAAACCAGAGGATCCACTTGACTGTAATGATCTCAAGGCAATGAGGTTTACTCGTGCGGTGATTTTTGAGACCTCGAGATTAGCTACAATAGTTAATGGAGTTCTAAGAAAAACAACTCACGACATGGAACTAAACGGATATTTGATTCCTAAAGGGTGGAGGATATATGTATATACGAGAGAGATCAATTATGATCCATTTCTGTATCCTGATCCTCAAACATTCAACCCTTGGAGATGGCTGGGTAACAGTCTAGAGTCACAAAGCCACTTCTTGATATTTGGAGGAGGGACCAGACAATGTCCAGGGAAGGAGTTGGGTATAGCGGAAATTTCCACTTTCTTACACTACTTTGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAACTAATGAAATTTCCGAGAGTTGTGGCACCAAATGGACTGCACATAAGGGTCTCGTCTTACTAA 1401 0.409 MALFMAIIGVVVLVLCFCSALLKWNEVRYRRKGLPQGTMGWPVFGETTEFLKQGPNFMKNKRARYGSFFKSHILGCPTIVSMDPELNRYILMNEAKGLVPGYPQSMLDILGKRNIAAVHGSTHKYMRGALLSIISPTLIRLQLLPKIDQFMRTHLSHWDNKLINIQEKTKEMAFLSSLKQIAGMESSSISQPFMTEFFKLVLGTLSLPINLPGTNYRQSIFNKARKSIISILSQLLEERKASQKAYGDMLGCLMNRDENRYKLTDEEIIDLIITIMYSGYETVSTTSMMAVKYLHDHPKVLEEIRKEHFAIRERKKPEDPLDCNDLKAMRFTRAVIFETSRLATIVNGVLRKTTHDMELNGYLIPKGWRIYVYTREINYDPFLYPDPQTFNPWRWLGNSLESQSHFLIFGGGTRQCPGKELGIAEISTFLHYFVTRYRWEEVGGDKLMKFPRVVAPNGLHIRVSSY 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0260 466 Pfam Cytochrome P450 35 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PANTHER CYTOCHROME P450 26 8 464 - -
Aed3g0260 466 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Aed3g0260 466 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 464 - -
Aed3g0260 466 SUPERFAMILY Cytochrome P450 28 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0260 466 Gene3D Cytochrome P450 25 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0260 Aed-Chr3 1951536 1955033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0260 82 466 Cytochrome P450 AT5G38970 67.617 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0260 K09590 - gmx:100785414 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0260 3 1951536 1955033 Aed3g0260 3 1951536 1955033 ECH