Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0239 ATGGTTAATCGAACTGATTTGGTTATCATTTGTGTCTCTGTTGGGGTGGCCCTTGGAGTTTTGATAGCATGCCTCATATATTTTGGCATCAGGTGGTACAAGAAGCGAGCTCATCTTAGCCGATCTGCGAATGAGCCTAGTTTAACAACTATCCCTATTCGAACAAATGGATTAGAAACAAGCACTGATTTCAGCGCTTCTCTCACCAGTTCCATAGCCACTTCAAGGTCACCAAATCCTCACAAAAGCTGGTGGAGTCATCAGAATAAAGATGGGTTTGCTTCAACATCAGGCATTCTGAAGTACTCATACAAACTGCATCATCGGAATCTTGTAAATTTGTTAGGATACTGCATAGATAAAGGACAGTTTATGCTGGTTTATGAGTTCATGAGTAATGGAAGTTTAGAAAGCCTTTTATATGGTGAAGAAAAGGAATTGAGTTGGGATGAAAGGCTGCAAATTGCTATTGATATTTCACACGGAATAGAATACCTTCATGAAGGGGCAGTCCCACCCATCATACATCGTGATTTGAAATCTGCTAATATATTGCTAGATCACTCAATGAGAGCTAAGGTTTCTGATTTTGGGCTCTCAAAGGAAGAGGCTGCAATGGATTATGATGGTGTAGATGGAATTCTTGACAAACAACTTGTGGGAAATTGCAATCTTGAAGAAGTTAGACAGCTTGCTAAAATTGCACACAAATGTTTGCACAAATCACCAAGGAAACGCCCCTCCATTGGTGAGGTTTCGCAGGGTATATTGAGGATTAAGCAAAAGCGCCCCATGAAAGAAGACACAATGTCATTTGCAAGCAGCAACTTCTCCCGAAGTGTGAGTCAAATAGAGGAACAACAGATTGAACTAACTAGAATAACCACCATGAACCACAGAGAAGTAGGGTGA 912 0.4079 MVNRTDLVIICVSVGVALGVLIACLIYFGIRWYKKRAHLSRSANEPSLTTIPIRTNGLETSTDFSASLTSSIATSRSPNPHKSWWSHQNKDGFASTSGILKYSYKLHHRNLVNLLGYCIDKGQFMLVYEFMSNGSLESLLYGEEKELSWDERLQIAIDISHGIEYLHEGAVPPIIHRDLKSANILLDHSMRAKVSDFGLSKEEAAMDYDGVDGILDKQLVGNCNLEEVRQLAKIAHKCLHKSPRKRPSIGEVSQGILRIKQKRPMKEDTMSFASSNFSRSVSQIEEQQIELTRITTMNHREVG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0239 303 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 105 203 - -
Aed3g0239 303 Gene3D Phosphorylase Kinase; domain 1 72 131 - -
Aed3g0239 303 SMART serkin_6 12 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0239 303 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Aed3g0239 303 Pfam Protein tyrosine and serine/threonine kinase 104 208 IPR001245 GO:0004672|GO:0006468
Aed3g0239 303 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 204 300 - -
Aed3g0239 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Aed3g0239 303 SUPERFAMILY Protein kinase-like (PK-like) 103 253 IPR011009 -
Aed3g0239 303 PANTHER OS01G0750732 PROTEIN 105 203 - -
Aed3g0239 303 PANTHER OS01G0750732 PROTEIN 9 105 - -
Aed3g0239 303 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 9 105 - -
Aed3g0239 303 PANTHER OS01G0750732 PROTEIN 204 300 - -
Aed3g0239 303 ProSiteProfiles Protein kinase domain profile. 33 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0239 303 Gene3D Transferase(Phosphotransferase) domain 1 132 206 - -
Aed3g0239 303 Gene3D Transferase(Phosphotransferase) domain 1 207 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0239 Aed-Chr3 1720914 1725484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0239 86 202 Receptor kinase-like Gene Family AT1G67720 54.622 9.95e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Aed3g0239 PK_Tyr_Ser-Thr 8.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0239 - - gmx:100794239 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0239 3 1720914 1725484 Aed3g0239 3 1720914 1725484 ECH