Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0228 ATGACGATTAGTAGTCTTGCACCCAAGGCAGAGAAGAAGAAATCAAGGAAGAACAAGGCAGTTGTTAATGAGAACGCACCCTTGTTGCCAAAAAGTCATGTTCAGGAGAGTGATGCTGGCTTTGATGATTTCAATGGAGCTTCGTTTTCTGGAGCTGTTTTTAACTTGTCCACCACAATTATTGGTGCTGGCATCATGGCCCTGCCTGCAACCTTGAAACAGTTGGGGATGATACCTGGTCTTCTTGCTATCATCATCATGGCTTTGTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCTTTTGGGAGCTATGGAAAAGCTCTGGTGCAGATATGTGTTATAATCAATAACATCGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGTGGAGATGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACAGGGCGGACATTTGTTGTCCTTTTCACAACACTTGCCATATTTGCACCCCTGTCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCCGCCCTTTCAGTTGCACTTGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTCAGGATAATCAGTGGAGGCATTGCGATGCCCAGACTCTTCCCTGTCACTACTGATGTGGCATCATTCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCGTATATCTGCCACTACAATGTTCACAGCATAGACAATGAACTTGAGGACTCCTCACAGATGCGAGGGGTTGTACAAACAGCCCTTGCTCTATGCTCTTCAGTGTACATAATGATAAGCTTCTTTGGGTTCCTCCTGTTTGGAGAAGGAACTCTTGATGATGTGCTGGCCAATTTCGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTCAATGATGCTGTTCGTATAAGCTACGCCGCACACCTGATGCTTGTATTTCCAGTTGTCTTCTATCCGTTGCGTCTCAACATAGATGGTCTCCTCTTCTCTAAATCAAAGCCTCTGGTTCTGGATAACTTCAGATTTGCATCACTCACTATTTCCCTTATTGGTGTTATCTTCCTGGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTTACTGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACCCTTAAGAACCGCTACAACATTGCTACCAAATCAGACAAGATTTTGTCTGTTGTTATGATAGTCCTGGCAGTCTTCTCAAATGTTGTGGCTATATACAGTGATGCCTATGCCTTGATCAAGCAGAACAATACATCACGTGAGTGA 1404 0.4352 MTISSLAPKAEKKKSRKNKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIIIMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGSYGKALVQICVIINNIGVLIVYMIIIGDVLSGTSSSGDGDHHYGILEGWFGVHWWTGRTFVVLFTTLAIFAPLSSFKRIDSLRFTSALSVALAVVFLVIAVGIAVVRIISGGIAMPRLFPVTTDVASFFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALALCSSVYIMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFSKSKPLVLDNFRFASLTISLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKNRYNIATKSDKILSVVMIVLAVFSNVVAIYSDAYALIKQNNTSRE 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0228 467 PANTHER AMINO ACID TRANSPORTER 7 462 - -
Aed3g0228 467 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 462 - -
Aed3g0228 467 MobiDBLite consensus disorder prediction 1 22 - -
Aed3g0228 467 Pfam Transmembrane amino acid transporter protein 47 453 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0228 Aed-Chr3 1649431 1652662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0228 16 467 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.722 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0228 K14207 - gmx:100796345 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0228 3 1649431 1652662 Aed3g0228 3 1649431 1652662 ECH