Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0225 ATGCAGGCCAGAGAGATGACAGGACTGAATTATTTACTCCCTTCAGAGCCTTACCCTGTAGGTCACTACAGCATGGTTGAGAACAGCATCCCGACATTTCAACTAAACAAACTCTCAAACCAATTCTATGGCTTCCATAACTTCAGCCCCCCTCAGTCCTCCTCATGCATAAGCAGCAACTCAACCTCTGATGAAGCAGATGAGCAGCAGCTGAGTCTGATCAGCGAGAGGAAGCACAGGAGGATGATATCGAACCGTGAGTCGGCGCGCCGGTCACGCATGAGGAAGCAGAAACACCTTGATGAACTGTGGTCGCAGGTGGTCTGGCTCAGGAATGAAAACCACCAGCTAATGGACAAGCTCAACCATGTGTCTGAGTCACATGACAAAGTTGTTCAAGAGAATGTTCAGCTGAGAGAAGAAGCCTCAGAACTTCGCCAAATGATTTGTGACATGCAGCTTCATAGTCCTTACCACCCTCCACCATTGAGCCCCATTGATGATGATGTCTCTCCCTATGTCAAAGACAATTAA 534 0.4813 MQAREMTGLNYLLPSEPYPVGHYSMVENSIPTFQLNKLSNQFYGFHNFSPPQSSSCISSNSTSDEADEQQLSLISERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDKVVQENVQLREEASELRQMICDMQLHSPYHPPPLSPIDDDVSPYVKDN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0225 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 75 138 IPR004827 GO:0003700|GO:0006355
Aed3g0225 177 Gene3D - 75 130 - -
Aed3g0225 177 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 176 IPR044521 -
Aed3g0225 177 Pfam bZIP transcription factor 77 129 IPR004827 GO:0003700|GO:0006355
Aed3g0225 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 80 95 IPR004827 GO:0003700|GO:0006355
Aed3g0225 177 MobiDBLite consensus disorder prediction 156 177 - -
Aed3g0225 177 Coils Coil 128 148 - -
Aed3g0225 177 SUPERFAMILY Leucine zipper domain 77 127 IPR046347 GO:0003700|GO:0006355
Aed3g0225 177 PANTHER BZIP TRANSCRIPTION FACTOR 1 176 - -
Aed3g0225 177 SMART brlzneu 73 137 IPR004827 GO:0003700|GO:0006355
Aed3g0225 177 CDD bZIP_plant_GBF1 78 129 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0225 Aed-Chr3 1625576 1626109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0225 42 172 bZIP Transcription Factor Family AT3G30530 66.176 1.29e-53 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed3g0225 bZIP_1 4.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0225 - - gmx:780548 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0225 3 1625576 1626109 Aed3g0225 3 1625576 1626109 ECH