Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0197 ATGAAACCACTTGTTCCAAAGACGATTGGTATAGAAGAATATGGCAAGAGATATGGATTTCGTCTTGCAATTGAGATAGTAAAGAGCAGCAAACTAGGTCTAAAAGTGGATCCGAGAAGGCAATATTATTATGGCAAACTGCCACTATCTTCAGAAGCATCAGAGGAGAAAGTAGAAGAACAAGAACAAGAGGTTGATGCTTATGCATCTTGGTCGTCAGAAACTGACATGTCTGCAATGGTTTCTGCTCTTTCTCAAGTTATGGAAACTACCGATCGGAACCAACACATGGTCAAATATGAACCTCCCCCTCCAGATCAAGGCTTCCAATCTACGTTAAGAGCAAATGTAGAGGTGACAAAGAAGCCACACTACAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCAGAAATTCGTGACCCAAAAAAAGCAGCAAGAGTATGGCTAGGAACCTTTGAAACAGCAGAGGATGCAGCCATTGCATATGACAAAGCAGCACTCAAGTTCAAAGGCACTAAAGCTAAGCTCAATTTCCCTGAAAGAGTTCATCATGATGTTGCCTATATGCAACACCAACAAGGTGGTGGTTCATCAAACAGAAACGTTTTTCCCTCCCATGCAACTTCCACCACCACTAGTACTCTTGAATCAAACGTTGTTGCCCTTCCCTCATTAATGTCCACACATGACCAACAAGTTTTCCCAAATCTGTATCAATATGCACAGATTCTGTCAAGTGGTGATGCAGAGTTCCCTTATTACACATCCCATCTTTTCAATCAACAACAACAACCTTTCAGTTCTCAAATCTCTACCTCTTCATCTCCATCCTCCTACTTCTACAACCAGCAACAACAATATGATCAACAAGGACATAATCACTCAAACCACTAG 900 0.42 MKPLVPKTIGIEEYGKRYGFRLAIEIVKSSKLGLKVDPRRQYYYGKLPLSSEASEEKVEEQEQEVDAYASWSSETDMSAMVSALSQVMETTDRNQHMVKYEPPPPDQGFQSTLRANVEVTKKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAAIAYDKAALKFKGTKAKLNFPERVHHDVAYMQHQQGGGSSNRNVFPSHATSTTTSTLESNVVALPSLMSTHDQQVFPNLYQYAQILSSGDAEFPYYTSHLFNQQQQPFSSQISTSSSPSSYFYNQQQQYDQQGHNHSNH 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0197 299 PRINTS Ethylene responsive element binding protein signature 147 163 IPR001471 GO:0003700|GO:0006355
Aed3g0197 299 PRINTS Ethylene responsive element binding protein signature 125 136 IPR001471 GO:0003700|GO:0006355
Aed3g0197 299 PANTHER DNA-BINDING DOMAIN 56 288 IPR044808 GO:0003700|GO:0009873
Aed3g0197 299 SMART rav1_2 124 187 IPR001471 GO:0003700|GO:0006355
Aed3g0197 299 Gene3D AP2/ERF domain 124 183 IPR036955 GO:0003700|GO:0006355
Aed3g0197 299 ProSiteProfiles AP2/ERF domain profile. 124 181 IPR001471 GO:0003700|GO:0006355
Aed3g0197 299 CDD AP2 123 182 IPR001471 GO:0003700|GO:0006355
Aed3g0197 299 SUPERFAMILY DNA-binding domain 124 182 IPR016177 GO:0003677
Aed3g0197 299 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 56 288 - -
Aed3g0197 299 Pfam AP2 domain 123 173 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0197 Aed-Chr3 1460483 1463549 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0197 80 261 AP2-EREBP Transcription Factor Family AT5G13330 47.644 4.69e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed3g0197 AP2 3.7e-14 CL0081