Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0193 ATGTTTCCTTCCACTAATTACACCTCCTCGGGCTCTTACCCTCGTTTCCCTTCGTCTTCTTCTTCCACTTCACCCTACCCTTCTTTTACTCTCTTTCACCCTGAAAACTCTTCTACCACCAACACCTTTCTTCATGATCCACTTGCTCTTACCTACATACCCTCTCATTACCACCATGCTCCAATCCCAGAAACACTAGCCAATTGGGCAGTTTCAGATTGTGCTGCTGCAGCAATGCTGAATCAGGATCTAGGTGGTGCCCTTTATGGCATCACTACTAAGAAGCCAGTGAAGAAAGCAACCAAGAAAGACAGGCACAGCAAGATTCACACTTCTCAGGGTTTGAGGGACCGAAGGGTGAGGCTGTCCATTGAGATCGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACTAAGTCCAAGAAGGCAATTAAGGAGCTTACTCGAACCAAACACAGTGCTGATAGCTTCGAATTATTGTCCTCATCTTCGGAGGGTGAAGTGGTTTCTACGATCCACCAAGACCTACAACAACAAGGGGTAGATTTGGAAGAGGGGAAGTCGAAAGAACCTGCTAACAATTGTGTTAAAGCAAAGATGAAGGAAACTAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGGTATTGTGCAACATAAGTGGTGAAGGGAAGGTGCAAGAGTTGAAGAAAAAGTGCCCTGCAACTGAAAACCCTCAAATCCTGAACCAATTAAGGTCACCCCTTCAGCCTCCTCATCCTCAAGATGTGGGTGGAGAAGTGCCAAGAGATGATGACTTCAACGTTATTGAGGAATCCATTGTCATCAGAAGAAAGCTGAAACACACACTGATGTCTTCTATTCATCACCAAAACGCTGTGATACCTAAGGAAACAAGTGCAAACAACAGTAGTGACTACCACTCCTTCCCCAATTTTTCTCCAAATTGGGAAGCCAATAATGGTGCTAATGGACGCTCCACCTTTTGTACAATAGCCAGCATGAATCTATCTACAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTCATCCAAGCTAA 1122 0.451 MFPSTNYTSSGSYPRFPSSSSSTSPYPSFTLFHPENSSTTNTFLHDPLALTYIPSHYHHAPIPETLANWAVSDCAAAAMLNQDLGGALYGITTKKPVKKATKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRTKHSADSFELLSSSSEGEVVSTIHQDLQQQGVDLEEGKSKEPANNCVKAKMKETREKARARARERTSSKVLCNISGEGKVQELKKKCPATENPQILNQLRSPLQPPHPQDVGGEVPRDDDFNVIEESIVIRRKLKHTLMSSIHHQNAVIPKETSANNSSDYHSFPNFSPNWEANNGANGRSTFCTIASMNLSTGLQIFGKSWEECTNPHPS 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0193 373 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 8 372 - -
Aed3g0193 373 MobiDBLite consensus disorder prediction 260 280 - -
Aed3g0193 373 MobiDBLite consensus disorder prediction 1 21 - -
Aed3g0193 373 ProSiteProfiles R domain profile. 214 231 IPR017888 -
Aed3g0193 373 Pfam TCP family transcription factor 101 231 IPR017887 -
Aed3g0193 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 8 372 IPR005333 GO:0003700
Aed3g0193 373 ProSiteProfiles TCP domain profile. 102 160 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0193 Aed-Chr3 1429434 1432267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0193 43 326 TCP Transcription Factor Family AT1G67260 34.106 2.74e-31 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed3g0193 TCP 1.5e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0193 - - gsj:114424268 613.609