Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed3g0190 | ATGAAATGTGTTCTGATATTCTTTCTTTATTTTGATCGCGTTCAACAATCAACGGTTCCACCTTTGTTTTTCGAGGAAATTTCCACGAAGTTGTATCTCAGAAAGAAAGTCCGCGAAATATATATGGGTAAGCCTAAGGATTCGCACTACTGGAATAAAGTTACGAAAGAAGAAAACGGTAGATGGAAGTGCAAGCAGTGTGGGATAAAGTTTACAGGAAGTGTTTCAAGAATCAAAGCACATGTGGATCGAATACAAGGAAAAGGCATTCGCATATGCTCCTCCTCTTCAAATGACATCACTACATTGCTAGCCGATCTAGGGGCCTACGAAATGATTGATATTGTTGGTAGTAGTTCGATTAACCATGTAAACAATACTCAACCAGAACCTTCATTAGCAGGTTGGGGAGCAGAAGACGGTGTGACAGTGAATGGAAGCAGCAATGTTTGTGGTCCTTCCCAAAGTGAGATAAACCAGTTGATTTCCGATCTAACAAGTGAGGAAGATGACATTAATAAACAGTTACAATCACTTGAGTCTTGCGGCAAGAAGCGCAATATTAGTGTTGGGTGTTGGTTAAATGAACTGCAGGACTTGAAGAAAAGGGCCGTTGATATTCAAAACTCATGGTCCAGTACTGACCTCGATGCGCTAAAGCCGTACATAGAAGAATTGACTGACGAAGTGGAAGATCATAAGTTAGATAAGCCTTTGGTGTTGTCAAATGAATTTGTTGGTTTGCAATTTAAGGAAAATGTTGAGGAGATGTGGAGCCTTCTGGAGGATGACCGTGTTTTCATCATTGGCCTACGAGGAATGGGTGGAGTGGGAAAAACATTCCTAGCAACTTTCGTGGAGAATGAGATCAAAAGAAGGAGAACTTTCAAGCATGTCTTCTGGGTCACCGTTTCCCATGATTTCACCATTCTCAAATTGCAGCATGACATTGCAGAAACAATAGGGGTAAAGCTTTACGGAGATGATGAGAGAACTAGAGCTGCAATTTTGACATCCGAGTTGGAGAAAAGACAAAAAACACTACTTTTTTTGGATGATGTTTGGAAATATATTGATCTACAAAAGGTGGGAATTCCCCTTAAACAGAATGGCATTAAATTGATTATCACAACTCGCTTGAAACATGTGTGTCAACAGATGGATTGCCTACCAGAAAATACCATAACAATGTACCCTTTCCATGAATATGAAGAAGCTTCTTGGGAGTTATTTTTGTTAAAACTTGGACACCATGGAACACCTGCGACAATCCCCCCTGAAGTACTAGAGATTGCAAAATCTATTGTAAAGAAATGTTATGGTTTACCACTTGGAATCGGTGTGATGGCTCGAACAATGAAAGGGGGGGGAAATGACATCCATAGGTGGAGAGATGCACTGAATAAACTTAACAAATTAGAAATGAGAGAAGAGATGAAAGAAGAAGTCTTAACAGTACTAAAACGTAGCTATGACTATTTAAATGAAAAGGACATACAGAAATGTTTCCTATACTGTGCGATGTCACCTTGTTTTTATGGAAAAGGGGAATTGGTTGCGATGCTTGTTAAGAATGGGTTGTTGAATGGAAAGAGGAGTTTGGAGGAAATATTTGATGAGGGATATGTGATGGTAAATAACCTCATAGAGCAGTCTTTGTTGGAGGACGAGGTGCTTGGGATTGCAATGAACGGTATGGTGAGGAACATGGCGTGTTATACCTTGAACGGTATGGTGAGGACCATGGAAAAATATGACGATTGGGAATGGGCAGTTGATTTGGAGGCAGTTTCTTTGACGGGTAACAGCATAGGACAAATTCCAGATGGCATATCACCTAATTGTCCATGTTTGTCCACTTTGATTTTATTTGGTACTAAGATCACTGACATTCCAGAGTGTTTTTTCACGCACATCAATGCTCTAAAACTACTTGATCTATCACATAATAATGAATTAAGATCTTTGCCGAATTCGCTGTCTAACTTGAGGTCTCTTACTTCTTTATTGCTCCATGGATGTTCACAATTGAAATCTATACCTCCACTGGGAGAGCTACAAGCACTGTCAACATTGGACATTTCACGTTGTTCGATCCTCCAGGCACCGCAAGGCTTGCAAAATCTAACAAACTTGAAATGGCTTGATATGTACCAGGATGGGAATTCAACATTGACACAGCTACCGGGATGTGTACTAGCCAGTTTGACCAATATGCAATATCTGGATCTCCGCGGTTGTTCAGGTATAAAAGCAGAAGATGTAAAAGGGATGACTATGCTTGAATGTTTTGCAGGAAGCTTTCTTGATCAGGATAACTACAACCGATACGTGCGACAAATTCAAGACGGTGGTTATGGCCCTCAAAACTATAATATCCATTTAGATAATTGCGGTTGTTATGATGATGAGGAGGAGGAGGAGGAGGAGGAACATTCTATTAAGTTTAATCATCGAAGTATATGGCTTGGAGATTGCGAAAAATTGTCCTATTTACTGCCAAGAGACCTTCGAGAACTGTCTGTACGTGCCAATAATCAATGGGCATACTTATGTGAGGCTTTCTCATCTAATGGTTCTTCTTCTTTGAAGAAGGTTAATGTTTCTGATTGCACAGAATTGAAGAGCTTGTTTTGTTTATCCCGTTCTTGTTCCTCATGCACAAGTATCCGAAACCTCGAATCTTTGTATCTCCGTAATTTGAAAAGTTTAACTTCCATCTGCAAGGAAGATGCAGATTTTACACAATCTTTGTCTTCAACGGGGGTGTTTTCACATCTCATGCATTTTGAAATCAAGGAATGCCATGAAATAAAGACGTTGCTGACGTCAAGATTAGTGGCACAACTTCAAAACCTGGAGTCTATAAAAGTATATAGCTGTCATTCAATGGAGAAGATATTTGATGATGATGGTGATGACGGCATTACACTCCCCAAGTTGACCAGTTTGATATTGTTGAGTCTACCAGAATTGAAGACCGTGTGCAACGGAATTTTATTCTGTGGATCTGAGAATATATTGAAAATCTATAACTGTCCCAATGAAGAAGAGCTCCTTAGGAATATGGCCGTGTGTCTCATAATAATCGATTCGGGGAAGAATGAGATATATATGGGTAGGCCTAAGGATTCGGACTACTGGAATAAAGTTACGAAAGAAGAAAACGGTAGATTGAAGTGCAAGCAGTGTGGGATAAAGTTTAAAGGAGGTGTTTCAAGAATCAAAGCACATGTGGATCGAATACAAGGAAAAGGCATTCGCATATGCTCCTCCTCTACAAATGACATCACTACATTGCTAGCCGATCTAGGGGCCTACGAAATGATTGATATTGTTGGTAGTAGTTCGATTAACCATGTAAACAATACTCAACCAGAACCTTTATTAGCAGGTTGGGCAGCAGAGCAGGCTGTGAATAAAAGTGGTCCTCTCGAAAGTAAGATAAACCAGTTGGTTTTCGATCTAACAAGTGAGGAAGACGACATTAATAAACAATTGCAATCGCTGGAGTCACGAGGCAAGAAGCGCAAGAGTCATGTTGACATTTGGTTAAATGAACTGCGTCACTTGAAGAAAATAGCCGCTGATTTAAAAAACTCAATGGATCAGTTTTGGTCCATTGACCTCGATGTGCTGATTGCACAAGTGCGAAGGCATAAGTTAAATAAGCCTTTGGTGTTGTCAAATGAATTTTTTGGTTTGCAATTTGAGGCAAATGTTAAGGAGATGTGGGATCTTCTGGTAGATCGTGATGTTTTCATTATTGGCATATGTGGAATGGGGGGGGTGGGGAAAACATTCCTAGCAACTTACATGGAAAATGAGATTAAAAGAAATGGAACTTTCAAGCATGTCTTCTGGGTAACTGTTTCCGATGATTTCAACATTTCCAAATTGCAACATGAGATTGCAGAAACAGTAGGGGTGAAACTTTACCGAGATGATGAGAGAAGTAGGGCGGCTATTTTGTCATTAGCCTTGGAGAAAATAGAAAAAACACTGCTTATCTTGGATGATGTTCGGAAATATATTGATCTACAAAAGGTCGGAATCCCTCTTAAACAGAATGGCATTAAATTGATTATCACAACTCGTTTAAAACATGTGTGTCAACAGATGGATTGTCTATCGGATAATACCATAATAGTGCACCCTTTCTCTGAAGAAGAAGAAGAAGCTGAAGCTTGGGAGTTATTTTTGCTAAAACTTGGACACCATGAAACACCTGCAACAATCGCCCCTGAAGTATTAGAGATTGCAAGATCTATTGTAAAGAAATGTGATGGTTTACCACTTGGAATCAGTGTGATGGCTCGAACCATGAAACGGGAGAATGACATACATTGGTGGAGACATGCACTAAATAAACTTAACAAATTAGAAATGGGAGAGGAGATGAAAGAAGAAGTCTTGAGAGTACTAAAACGTAGTTATGATAATTTAGCTGAAAAGGACTTACAAAAATGTTTCCTATACTTTGCACAACATTTTGGGTTAGGAATAAAAGATGATTATGTTAGAAAGCTTGTTGAGAGTGGGTTGTTAAATGGAAAGATGAGTGTGGGGGAAATACTTGATGAGGGGCATGTTATAGTAGATAAACTTGTAGACCATTCTTTGTTGTTGTATGATGAAAAAAATGGCATGTTACGAATGCATGATCTGGCGAGAAACATGGCGTGCCATATCTTGAATGAGAGTCAGAATTACATGGGAAAATATAATGAAAAATTGAAAAAGATACCTCAGATGCAGGAATGGTCAGTTGATTTGGAGGCAGTTTTTCTTATGAAGAACGAGATAGAAGAAATCCCCGAGGACACATCACCTTATTGTCCACGCTTGTCGGTCTTGATTCTATCCGACAATTACATCAGTCATATTCCGGAGCGTTTTTTCACAAACATGAATGCTCTAACACTACTTGATCTATCAGAAAATCCTAGATTAAAATCTTTGCCGAATTCGCTGTCTAACTTGAGATCTCTTATTTCTTTAGTCCTCAAAGGATGCTCAGAGTTGAAATATATACCTCCACTGGATGAGTTACAAGCATTGTCAAGATTGGACATTTCATATTGTTCGAACCTCCAGGTACCCAGAGGCTTGGAAAATCTAACAAGCTTGACATGGCTTAATCTGTTCCAGCATGCGAATTCAAAGTTGAAACCGCTACAAGGAAGTGCACTAGCCTGTTTGACCAATATGCGATATCTGAATCTTCACGGTTGTTCAGGTATAAAAGCAGAAGATGTAAAAGGGATGACCATGCTTGAGTGTTTTGCAGGAAGCTTTCTTGATCAGGATAACTACAGCCGTTACGTGCGACAAATTCAAGACGGTGGTTATGGACCTCAAACCTATGATATCCATTTTGGAAAATTTAAGAATGCAACGCCTGATTTGTATCTGGTTCCTATTTATGTTGAATTCAAGCGTCGAAGGGTATGCTTTGGAGATTGCAATGAATTACCCTACTTACTGCCACAAGACCTTGCGGAATTGTCTGTAAGTCACAATAATCAATGGGAATGCTTATGTGCTTCTTTGCCATCTAATGGATTTTGTTTTTTGGAGAAGATTTTCATTTCTTATTGCACAAAATTGAAGAGCGTGTTCTGTTTATGGTGTTCCTCATGCACTAATATCCGAACCCTTCAATATTTGAATCTTCATTGTTTGGAAAGTTTAACTGCCATCTGCAAGGAAGATACATTTATTGATTTAACACAATCTTTGTCTTTGAGAGGGGTGTTTTCTCAACTCCAGAGATTTTCTATCGGTGAATGCCATTCAATAGAGACGCTGCTGACACCAGAATTAGTGCCACAACTTCGAAACCTGGAGTATATAAATGTACAGGACTGCAAGTCAATAAAGGAGATATTTGCAGGGAGTCACAGTGGTGATGATGATGGTTTCAACATTAAACTCCCCAAGTTGACCAAATTGATATTGGTGCGTCTACCAGAATTGAAGACCGTGTGCAAAGGAATTTTATCCTGTGAATCTGAGGATATATTGTACATCGATGACTGTCCCAATATACAAGAGCTCCATAGAATACGTCGTGTATGA | 6081 | 0.393 | MKCVLIFFLYFDRVQQSTVPPLFFEEISTKLYLRKKVREIYMGKPKDSHYWNKVTKEENGRWKCKQCGIKFTGSVSRIKAHVDRIQGKGIRICSSSSNDITTLLADLGAYEMIDIVGSSSINHVNNTQPEPSLAGWGAEDGVTVNGSSNVCGPSQSEINQLISDLTSEEDDINKQLQSLESCGKKRNISVGCWLNELQDLKKRAVDIQNSWSSTDLDALKPYIEELTDEVEDHKLDKPLVLSNEFVGLQFKENVEEMWSLLEDDRVFIIGLRGMGGVGKTFLATFVENEIKRRRTFKHVFWVTVSHDFTILKLQHDIAETIGVKLYGDDERTRAAILTSELEKRQKTLLFLDDVWKYIDLQKVGIPLKQNGIKLIITTRLKHVCQQMDCLPENTITMYPFHEYEEASWELFLLKLGHHGTPATIPPEVLEIAKSIVKKCYGLPLGIGVMARTMKGGGNDIHRWRDALNKLNKLEMREEMKEEVLTVLKRSYDYLNEKDIQKCFLYCAMSPCFYGKGELVAMLVKNGLLNGKRSLEEIFDEGYVMVNNLIEQSLLEDEVLGIAMNGMVRNMACYTLNGMVRTMEKYDDWEWAVDLEAVSLTGNSIGQIPDGISPNCPCLSTLILFGTKITDIPECFFTHINALKLLDLSHNNELRSLPNSLSNLRSLTSLLLHGCSQLKSIPPLGELQALSTLDISRCSILQAPQGLQNLTNLKWLDMYQDGNSTLTQLPGCVLASLTNMQYLDLRGCSGIKAEDVKGMTMLECFAGSFLDQDNYNRYVRQIQDGGYGPQNYNIHLDNCGCYDDEEEEEEEEHSIKFNHRSIWLGDCEKLSYLLPRDLRELSVRANNQWAYLCEAFSSNGSSSLKKVNVSDCTELKSLFCLSRSCSSCTSIRNLESLYLRNLKSLTSICKEDADFTQSLSSTGVFSHLMHFEIKECHEIKTLLTSRLVAQLQNLESIKVYSCHSMEKIFDDDGDDGITLPKLTSLILLSLPELKTVCNGILFCGSENILKIYNCPNEEELLRNMAVCLIIIDSGKNEIYMGRPKDSDYWNKVTKEENGRLKCKQCGIKFKGGVSRIKAHVDRIQGKGIRICSSSTNDITTLLADLGAYEMIDIVGSSSINHVNNTQPEPLLAGWAAEQAVNKSGPLESKINQLVFDLTSEEDDINKQLQSLESRGKKRKSHVDIWLNELRHLKKIAADLKNSMDQFWSIDLDVLIAQVRRHKLNKPLVLSNEFFGLQFEANVKEMWDLLVDRDVFIIGICGMGGVGKTFLATYMENEIKRNGTFKHVFWVTVSDDFNISKLQHEIAETVGVKLYRDDERSRAAILSLALEKIEKTLLILDDVRKYIDLQKVGIPLKQNGIKLIITTRLKHVCQQMDCLSDNTIIVHPFSEEEEEAEAWELFLLKLGHHETPATIAPEVLEIARSIVKKCDGLPLGISVMARTMKRENDIHWWRHALNKLNKLEMGEEMKEEVLRVLKRSYDNLAEKDLQKCFLYFAQHFGLGIKDDYVRKLVESGLLNGKMSVGEILDEGHVIVDKLVDHSLLLYDEKNGMLRMHDLARNMACHILNESQNYMGKYNEKLKKIPQMQEWSVDLEAVFLMKNEIEEIPEDTSPYCPRLSVLILSDNYISHIPERFFTNMNALTLLDLSENPRLKSLPNSLSNLRSLISLVLKGCSELKYIPPLDELQALSRLDISYCSNLQVPRGLENLTSLTWLNLFQHANSKLKPLQGSALACLTNMRYLNLHGCSGIKAEDVKGMTMLECFAGSFLDQDNYSRYVRQIQDGGYGPQTYDIHFGKFKNATPDLYLVPIYVEFKRRRVCFGDCNELPYLLPQDLAELSVSHNNQWECLCASLPSNGFCFLEKIFISYCTKLKSVFCLWCSSCTNIRTLQYLNLHCLESLTAICKEDTFIDLTQSLSLRGVFSQLQRFSIGECHSIETLLTPELVPQLRNLEYINVQDCKSIKEIFAGSHSGDDDGFNIKLPKLTKLILVRLPELKTVCKGILSCESEDILYIDDCPNIQELHRIRRV | 2026 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed3g0190 | 2026 | Pfam | Leucine rich repeat | 618 | 674 | IPR001611 | GO:0005515 | |
| Aed3g0190 | 2026 | Pfam | Leucine rich repeat | 1614 | 1672 | IPR001611 | GO:0005515 | |
| Aed3g0190 | 2026 | Gene3D | Ribonuclease Inhibitor | 1566 | 1805 | IPR032675 | - | |
| Aed3g0190 | 2026 | ProSiteProfiles | Leucine-rich repeat profile. | 641 | 664 | IPR001611 | GO:0005515 | |
| Aed3g0190 | 2026 | Gene3D | Ribonuclease Inhibitor | 1831 | 2024 | IPR032675 | - | |
| Aed3g0190 | 2026 | Gene3D | Ribonuclease Inhibitor | 880 | 1028 | IPR032675 | - | |
| Aed3g0190 | 2026 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 1683 | 2002 | IPR044974 | GO:0006952 | |
| Aed3g0190 | 2026 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1225 | 1494 | IPR027417 | - | |
| Aed3g0190 | 2026 | Pfam | NB-ARC domain | 1238 | 1481 | IPR002182 | GO:0043531 | |
| Aed3g0190 | 2026 | Pfam | NB-ARC domain | 253 | 492 | IPR002182 | GO:0043531 | |
| Aed3g0190 | 2026 | PRINTS | Disease resistance protein signature | 439 | 453 | - | - | |
| Aed3g0190 | 2026 | PRINTS | Disease resistance protein signature | 341 | 355 | - | - | |
| Aed3g0190 | 2026 | PRINTS | Disease resistance protein signature | 684 | 700 | - | - | |
| Aed3g0190 | 2026 | PRINTS | Disease resistance protein signature | 268 | 283 | - | - | |
| Aed3g0190 | 2026 | PANTHER | - | 1175 | 1679 | - | - | |
| Aed3g0190 | 2026 | Gene3D | Ribonuclease Inhibitor | 557 | 776 | IPR032675 | - | |
| Aed3g0190 | 2026 | Gene3D | - | 1224 | 1381 | IPR027417 | - | |
| Aed3g0190 | 2026 | Gene3D | - | 238 | 392 | IPR027417 | - | |
| Aed3g0190 | 2026 | SMART | AAA_5 | 1252 | 1387 | IPR003593 | - | |
| Aed3g0190 | 2026 | SMART | AAA_5 | 265 | 401 | IPR003593 | - | |
| Aed3g0190 | 2026 | PANTHER | - | 1683 | 2002 | - | - | |
| Aed3g0190 | 2026 | SUPERFAMILY | L domain-like | 588 | 1020 | - | - | |
| Aed3g0190 | 2026 | SUPERFAMILY | L domain-like | 1552 | 2019 | - | - | |
| Aed3g0190 | 2026 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 190 | 1013 | IPR044974 | GO:0006952 | |
| Aed3g0190 | 2026 | PANTHER | - | 190 | 1013 | - | - | |
| Aed3g0190 | 2026 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 241 | 506 | IPR027417 | - | |
| Aed3g0190 | 2026 | Gene3D | - | 1392 | 1483 | IPR042197 | - | |
| Aed3g0190 | 2026 | Gene3D | - | 403 | 495 | IPR042197 | - | |
| Aed3g0190 | 2026 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 1175 | 1679 | IPR044974 | GO:0006952 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed3g0190 | Aed-Chr3 | 1394465 | 1406425 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Aed3g0190 | 567 | 768 | WRKY Transcription Factor Family | AT5G45050 | 26.126 | 3.33e-07 | 53.9 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed3g0190 | - | - | mtr:MTR_7g018640 | 1386.32 |