Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0185 ATGTTTCACTTTCGGACCAAATGTGGGACCCACATAGTACTGTGTCCTGAGTGCTGGCTACTCACAAAGGCGGGAACCAGTTTTTGTCGCAGAGATTGGTTTCTGGTTGTGGCTTTGTTTGTTTTATGTGCTCTCATGTTTAGGAAAAGGCACACCCCTTCTTCTCTTGCTAGGGAATTGTTGGCATTCCAGCCACTTTTTCTACTCTTCTTGTTCAGCTTGCACCACAACACTGTGCAATGTCAAGGTAGGTTGAGTAAACATGTTTCTTCTGAGCCTCCCTCACCTTCTAGGCCATCACCATCATCATCAGGATACAAGGATGATCCTAGGAAAATAATTTTGAGCATGGTTTTAGGAGCAGTCACTGGACTAGCTTGTTCTGTTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTATCTGAACCGCACACCAATCCTCAAGGGCCCTGTCATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATCAGCTTTGGCAAAGGAAAACCACTTGCTTGGTTCGAGTCCTAATGGGAAGTACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTCAAAAGGCTAACACCCTTTGAGAGCAATTCCCCGGAGGCTAAGAGAAAATCAGTGAAGAGGCAGATACAGACTGAGCTAGAGCTTCTTGCAAGCCTAAGGCATAGGAACTTGATGAGTTTGAGGGCTTATGTTCGTGAGCCTGATGGGTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCTGATGTGTTGAATAGAGTGAGGGAGAATGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATTCTGCACTACAACTTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCCAGATTGGCAGATTATGGCTTGGCTAAACTTCTTCCCAACTTGGATAGAGGAACTTCTCTCTACACCCCTCCTGAATGTTTCCACAATTGCAGCAGGTACACTGACAAAAGTGACATATTCAGTTTTGGCATGATACTAGGTGTTTTATTAACGAGTAAGGACCCTACTGATCCATTCTTTGGAGAAGCAGCCAGTGGGGGAAGTCTTGGATGTTGGCTGAGACACTTGCAGCAAGCTGGTGAAGCTCGCGAAGCTCTAGATAAGAGCATGTTAGGGGAAGAAGGTGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCATCTAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 1353 0.4582 MFHFRTKCGTHIVLCPECWLLTKAGTSFCRRDWFLVVALFVLCALMFRKRHTPSSLARELLAFQPLFLLFLFSLHHNTVQCQGRLSKHVSSEPPSPSRPSPSSSGYKDDPRKIILSMVLGAVTGLACSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVLNRVRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGTSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTSKDPTDPFFGEAASGGSLGCWLRHLQQAGEAREALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0185 450 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 57 450 - -
Aed3g0185 450 Gene3D Transferase(Phosphotransferase) domain 1 252 449 - -
Aed3g0185 450 MobiDBLite consensus disorder prediction 87 108 - -
Aed3g0185 450 SUPERFAMILY Protein kinase-like (PK-like) 171 444 IPR011009 -
Aed3g0185 450 PANTHER - 57 450 - -
Aed3g0185 450 ProSiteProfiles Protein kinase domain profile. 168 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0185 450 Gene3D Phosphorylase Kinase; domain 1 157 251 - -
Aed3g0185 450 CDD STKc_IRAK 174 447 - -
Aed3g0185 450 Pfam Protein kinase domain 170 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0185 Aed-Chr3 1365312 1369918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0185 114 447 Receptor kinase-like Gene Family AT2G31880 34.930 4.18e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Aed3g0185 Pkinase 8.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0185 - - gmx:102664273 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0185 3 1365312 1369918 Aed3g0185 3 1365312 1369918 ECH