Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0175 ATGACTCAGTCTGTTGAGGTGCTGAATCGGTATGGGACGGATCTGGTGGGGGAACCTAGAGGTTCTGATTCTGAGTGTTTGGCGGGTTTTGAGTGTTTTCTGAATATTGTGAGGGCATTGGGAATGGGATCGTGCATATCGGAGGTTGGGGCTGGTGGTAGTTCCCCTCCTCTTCTTTCTTATTCGCCTGAATCCAACATGGATGGTGGGAAGAGAAGAAGGTTGAGGGGTTCCCCTTCCTTTGATTCCAAAGTGCCTGGGAGGATGTTTTCGAATGGGTCAAGTGAGGTTGCATCCATGTATTGCAAGCAAGGAAGAAAAGGGATCAACCAAGACGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAGGACACCATTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCACAGAGTTGCAAAGAAAGTTAGGGATTCTTTTCCTTTAAGGCTTAATGCCCAATGGGATTTGCATCAGAAGAATAGAGATGGACTCGGTGATAAATCTGAAGGGAATGGTCCAAATGGAATTAGACTGGTGGATGAGAAAATGATTCCCACTGATCATGAACATGATGAAACAGATACTATTTTGACATTACGAGAATCTTTTTTGAAGGCTTGTAAGATTATGGACAAAGATCTGAAAGTACATCCTGATATTGACTGCTTTTGTAGTGGGACTACATCAGTTACCTTGGTGAAGCAAATTTGGGATGTTTTATCAAATGATGAAGTTGTGGACATTGTAGCATCTGCTCCACGGTCTACTGCTGCTAGAGTATTGGTTGAGTCAGCTGTTCAGGCATGGAAGACAAAATATCCTTTTAGTAAGGTTGATGATTGTGCCGCGGTTTGCCTCTTCTTTGATTCTGATTCAGATTTCAAGTCAACAGATACCAACGATAACTTGATACCGGATGCATCTATTGATCAGTCTGAGCAGTTATCTTTACTTGGTGAAAAGCGAGATGGAATGGAAGCTGAAAAACAGCAGCAATAG 1011 0.4283 MTQSVEVLNRYGTDLVGEPRGSDSECLAGFECFLNIVRALGMGSCISEVGAGGSSPPLLSYSPESNMDGGKRRRLRGSPSFDSKVPGRMFSNGSSEVASMYCKQGRKGINQDAMLVWENFCSKEDTIFCGVFDGHGPYGHRVAKKVRDSFPLRLNAQWDLHQKNRDGLGDKSEGNGPNGIRLVDEKMIPTDHEHDETDTILTLRESFLKACKIMDKDLKVHPDIDCFCSGTTSVTLVKQIWDVLSNDEVVDIVASAPRSTAARVLVESAVQAWKTKYPFSKVDDCAAVCLFFDSDSDFKSTDTNDNLIPDASIDQSEQLSLLGEKRDGMEAEKQQQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0175 336 Gene3D - 239 302 IPR036457 -
Aed3g0175 336 PANTHER ALPHABET, ISOFORM E-RELATED 42 239 - -
Aed3g0175 336 MobiDBLite consensus disorder prediction 57 89 - -
Aed3g0175 336 SUPERFAMILY PP2C-like 91 293 IPR036457 -
Aed3g0175 336 PANTHER ALPHABET, ISOFORM E-RELATED 240 299 - -
Aed3g0175 336 Gene3D - 91 238 IPR036457 -
Aed3g0175 336 ProSiteProfiles PPM-type phosphatase domain profile. 97 336 IPR001932 -
Aed3g0175 336 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 239 - -
Aed3g0175 336 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 240 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0175 Aed-Chr3 1265816 1274962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0175 240 312 PP2C-type Phosphatase Gene Family AT3G02750 60.811 6.27e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0175 - - gmx:100810538 434.106