Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0167 ATGAAAAGTTTTCAGCTTCACTTGAGAGTTTTGAGTTTGCTGATTGCACTTTCCTACTTGCTGACATGCTTAGGGAACAATAATGACGTGGCTGTCCAGTTGAATGATGATGTTCTTGGCCTGATTGTGTTCAAATCAGACCTTCATGACCCTTCTTCTCATCTTGCTTCATGGAATGAAGATGATGTCAATCCATGTTCATGGCAGTTCGTGCAGTGCAATCCTGAGAGTGGAAGAGTTTCTGAGGTCTCATTGGATGGCTTGGAGTTATCTGGGAAGGTTGGAAGAGGTCTTGAGAAGTTGCAGCATCTAACGGTATTGTCCCTTTCTCACAACAACTTGAGTGGGAGCATTAGTCCATCACTTACTCTTTCCAATAGTCTTGAGAGGCTCAACCTTAGTCACAATTCTCTTTCTGGTTCCATTCCTACTTCTTTTGTGAATATGAATTCAATAAAATTTATTGATCTTTCAGAGAATTCATTTTCGGGACCAATCCCCGAGAGTTTTTTTGAGGGCTGTTCTTCCCTTCATCAAATTTCTCTAGCGAGGAACATGTTTGATGGATCAGTTCCTGTCTCACTGTCCAGATGTTCCTCATTGAATAGCCTTAATCTTTCCAAAAACCGTTTCTCTGGTAATGTGGACTTTAGTGGGATTTGGTCATTGAACAGACTTAGGACTTTGGATCTATCCAACAATGTATTATCAGGGTCTTTGCCTAATGGAATCTCAGCCATACATAACTTGAAAGAGATCTTATTACAAGGTAATCAGTTTTCAGGTCCACTATCCACTGATATTGGATTCTGCCTGCATCTGAGTAGGTTGGATTTTAGTGATAATCAGTTCAGTGGAGAACTACCTGAGTCACTAGGGATGCTTAGTTCTTTGAGCTATTTCAAGGCATCAAATAATCATTTGAACAGTGAAGTCCCCATATGGTTTGGTAACATGACCAGTCTGGAGTACCTAGACCTCTCAAACAATCAGTTCACTGGAAGCATGCCACAGTCAATAGGGGAACTGAGATTACTGACTCATCTGAGCATTTCAAATAACAACCTTGTTGGAACTATTCCATCATCATTAAGTTCCTGCAGTAAGTTATCTCTGATCCAGCTCAGAGGCAATGGTTTCAACGGCACGATTCCTGAGGGTTTGTTCAGCCTAGGATTGGAGCAAATAGACTTGTCCCATAATGAATTGAGTGGCTCAATTCCACCAGGATCAAGCAGGCTCTTGGAAACTCTGACCAACTTGGATCTTTCAGATAATCATCTCCAAGGGAATATCCCTGCAGAAATTGGTCTTCTTTCAAAATTAACATATTTGAATCTGTCTTGGAATGATCTTCATTCACAGATGCCTCCAGAATTTGGCCTCCTTCAGAACCTGACGGTTTTGGATCTTCGAAACAGTGCCTTGCATGGTTCAATTCCAGCAGATATATGTGACTCAGGCAATTTAGCTGTCCTCCAACTTGATGGAAATTCACTTGAAGGGCAAATTCCAAACTGGATTGGGAATTGTAGCTCTCTTTACTTGCTGAGTTTGTCTCACAATAATTTGACTGGTTCAATTCCAAAGTCCATGTCAAAGCTAAACAAGCTAAAAATCCTCAAGCTGGAATTCAATGAACTTAGTGGAGAGATACCAATGGAGCTTGGAATGCTTCAGAGTCTTCTTGCTGTGAACATATCATACAACAGGCTCACAGGCAGGCTTCCAACAAGTAGCATATTTCAGAACTTGGACAAAAGTTCCTTGGAAGGAAACCTTGGTCTTTGTTCACCCTTGTTGAAGGGCCCATGTAAGATGAATGTCCCTAAACCACTAGTGCTTGACCCAAATGCCTATGACAGCCAAATGAGTCCTCAAAGGCAAAAAAACGAACCATCAGAGTCTGGCCCGGTCCATCGCCACAGGTTCCTTAGTGTATCTGCTATTGTAGCAATATCTGCATCATTTGTCATTGTATTAGGAGTGATTGCTGTTAGCCTACTTAATGTTTCTGTGAGGAGAAGGCTATCATTTGTGGATAATGCTTTGGAAAGCATGTGCTCAAGTTCTTCAAGATCAGGAAGTCCAGCCACAGGAAAGCTTATTCTGTTTGATTCCCAGTCCTCTCCTGATTGGATCAGCAATCCTGAGTCCTTGCTCAACAAGGCATCTGAGATTGGAGAAGGAGTATTTGGAACACTCTACAAGGTTCCATTGGGATCACAAGGTAGAATGGTAGCAATCAAGAAGCTTATATCCACAAATATTATCCAATATCCAGAAGACTTTGATAGGGAAGTTAAAATCCTAGGGAAAGCAAGGCACCCAAATCTGATTGCATTGAAAGGATACTATTGGACTCCTCAACTACAACTTTTAGTAACCGAGTTTGCACCAAATGGTAGCTTGCAAGGCAAGCTACATGAAAGGCTTCCTTCAAGTCCTCCACTTTCTTGGGCTACAAGGTTCAAAATCTTGCTTGGAACAGCAAAGGGGCTTGCTCATTTGCACCACTCTTTCCGTCCACCAATCATCCACTACAACATAAAGCCAAGTAACATCTTGCTCGACGAAAACTACAACGCCAAGATCTCGGATTTCGGGTTGGCTCGGCTTCTGACAAAGCTGGACAGGCATGTGATGAGCAACAGGTTCCAGAGTGCATTGGGATACGTGGCACCGGAATTAGCATGCCAGAGCTTAAGGGTGAATGAGAAATGCGATGTGTATGGTTTTGGAGTGATGATCCTTGAGCTGGTGACAGGTAGGAGGCCAGTGGAGTATGGAGAAGACAATGTGCTGATACTGAATGACCATGTGAGAGTGCTGCTTGAGCAAGGTAATGTGTTGGAGTGTGTGGATCAAAGCATGAGTGAGTATCCAGAAGATGAGGTGTTGCCAGTTCTGAAGCTAGCAATGGTATGCACTTCTCAAATTCCTTCTAGCAGGCCTACTATGGCTGAAGTGGTGCAAATTCTACAGGTCATTAAAACCCCAGTTCCTCAAAGGATGGAAGTGTTTTGA 3027 0.4258 MKSFQLHLRVLSLLIALSYLLTCLGNNNDVAVQLNDDVLGLIVFKSDLHDPSSHLASWNEDDVNPCSWQFVQCNPESGRVSEVSLDGLELSGKVGRGLEKLQHLTVLSLSHNNLSGSISPSLTLSNSLERLNLSHNSLSGSIPTSFVNMNSIKFIDLSENSFSGPIPESFFEGCSSLHQISLARNMFDGSVPVSLSRCSSLNSLNLSKNRFSGNVDFSGIWSLNRLRTLDLSNNVLSGSLPNGISAIHNLKEILLQGNQFSGPLSTDIGFCLHLSRLDFSDNQFSGELPESLGMLSSLSYFKASNNHLNSEVPIWFGNMTSLEYLDLSNNQFTGSMPQSIGELRLLTHLSISNNNLVGTIPSSLSSCSKLSLIQLRGNGFNGTIPEGLFSLGLEQIDLSHNELSGSIPPGSSRLLETLTNLDLSDNHLQGNIPAEIGLLSKLTYLNLSWNDLHSQMPPEFGLLQNLTVLDLRNSALHGSIPADICDSGNLAVLQLDGNSLEGQIPNWIGNCSSLYLLSLSHNNLTGSIPKSMSKLNKLKILKLEFNELSGEIPMELGMLQSLLAVNISYNRLTGRLPTSSIFQNLDKSSLEGNLGLCSPLLKGPCKMNVPKPLVLDPNAYDSQMSPQRQKNEPSESGPVHRHRFLSVSAIVAISASFVIVLGVIAVSLLNVSVRRRLSFVDNALESMCSSSSRSGSPATGKLILFDSQSSPDWISNPESLLNKASEIGEGVFGTLYKVPLGSQGRMVAIKKLISTNIIQYPEDFDREVKILGKARHPNLIALKGYYWTPQLQLLVTEFAPNGSLQGKLHERLPSSPPLSWATRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENYNAKISDFGLARLLTKLDRHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEQGNVLECVDQSMSEYPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0167 1008 PANTHER BNAA09G02190D PROTEIN 13 1006 - -
Aed3g0167 1008 PRINTS Leucine-rich repeat signature 322 335 - -
Aed3g0167 1008 PRINTS Leucine-rich repeat signature 415 428 - -
Aed3g0167 1008 ProSitePatterns Protein kinases ATP-binding region signature. 727 751 IPR017441 GO:0005524
Aed3g0167 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 13 1006 - -
Aed3g0167 1008 Gene3D Ribonuclease Inhibitor 37 191 IPR032675 -
Aed3g0167 1008 CDD STKc_IRAK 727 995 - -
Aed3g0167 1008 ProSiteProfiles Protein kinase domain profile. 721 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0167 1008 ProSiteProfiles Leucine-rich repeat profile. 103 125 IPR001611 GO:0005515
Aed3g0167 1008 SUPERFAMILY RNI-like 142 453 - -
Aed3g0167 1008 Gene3D Ribonuclease Inhibitor 320 608 IPR032675 -
Aed3g0167 1008 Gene3D Transferase(Phosphotransferase) domain 1 803 1005 - -
Aed3g0167 1008 Gene3D Ribonuclease Inhibitor 192 316 IPR032675 -
Aed3g0167 1008 Pfam Leucine rich repeat 103 161 IPR001611 GO:0005515
Aed3g0167 1008 Pfam Leucine rich repeat 489 548 IPR001611 GO:0005515
Aed3g0167 1008 Pfam Leucine rich repeat 304 356 IPR001611 GO:0005515
Aed3g0167 1008 Pfam Leucine Rich Repeat 225 245 IPR001611 GO:0005515
Aed3g0167 1008 Gene3D Phosphorylase Kinase; domain 1 721 802 - -
Aed3g0167 1008 SUPERFAMILY Protein kinase-like (PK-like) 724 1002 IPR011009 -
Aed3g0167 1008 MobiDBLite consensus disorder prediction 618 638 - -
Aed3g0167 1008 ProSiteProfiles Leucine-rich repeat profile. 417 439 IPR001611 GO:0005515
Aed3g0167 1008 SMART LRR_typ_2 439 462 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 343 367 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 463 487 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 319 342 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 101 126 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 223 247 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 559 584 IPR003591 -
Aed3g0167 1008 SMART LRR_typ_2 388 414 IPR003591 -
Aed3g0167 1008 SUPERFAMILY L domain-like 393 598 - -
Aed3g0167 1008 Pfam Protein kinase domain 723 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0167 1008 Pfam Leucine Rich repeat 440 452 IPR001611 GO:0005515
Aed3g0167 1008 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0167 Aed-Chr3 1199019 1202946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0167 11 1005 Receptor kinase-like Gene Family AT3G28040 63.158 0.0 1234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aed3g0167 Pkinase 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0167 - - gmx:100813764 1822.36