Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0165 ATGGATTCTTCTTCTTCTTCTTGTCCGATCTCTCACTTGAGAGCATCCGCGAATTCGTTCCTCTCTAAATACGAACCTCTCGGTCTGGTTCTCGCTCCTCTCCTCTCTCTCCTCCTCGCCCATGCTCTCCGCTCCTTCTTCCGCCTCCTCTCCGATAACGGACTCAAAGCCACGCTCATAGGGTTTCTCATGAACACTGTCAAATTGCTCCCCGGTGTCAAGAGATACATAGATGCCGAAAAACAAAAGGTTGTGGATAAGATGCAATCTGATGGTAAATCTAAAAGAGAAGGTTGGAAAACTGAGTTGCCAAGCACAGGATTAGGGACATCTGTCCTTGAAAAAATGAGAGAGGAGAAAATAAATGATGCGGTTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAAACTGATGGGCATTTTTCTCTGATAAATGAGGCATGTTCAATGTTTGCACATACCAATCCCCTGCATTTGGATGTATTCAAGAGTGTTGCACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCAGCACTTCTTGGAAGTAAGGAAAAGAGTTCTGGAGGACAAATATGTGGCAACATGACATCAGGCGGGACTGAAAGTATATTATTAGCTGTCAAATCGTCTCGTGACTTTATGAAATCTAAGAAAGGAATTACAAGACCTGAAATGATTATTCCTGAATCTGGACACTCAGCTTATGACAAGGCTGCACAGTATTTCAATATCAAACTATGGCGTGTACCAGTTAACAAGATTTTTCAAGCAGATGTGAAAGCGATTCGACGTCATATTAACAAAAATACCATTTTGATTGTTGGATCTTCTCCTGGGTTTCCTCATGGAGTAATTGACCCCATCGAAGAACTTGGGCATCTGGCATTAAGCTTTGGTATCTGTTTCCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCACATTCCACCTTTTGATTTTTCGGTTAAAGGGGTTTCTTCAATATCAGTGGATGTACATAAATACGGTTTAGCTCCCAAAGGAACAAGTGTAGTTCTTTATAGAAACCATGAAATCAGAAAGCATCAATTTGTCGCTGCTGGAAGCAGGCCTGGAAGTCTTATTGCTGGTGCATGGGCAGCAATGATGTCTCTAGGGAAAGAAGGTTACTTGGAAAATACAAAAGCAATTATGGAAGGGTCAAGAAGAATACAGAAAGGCATAGAGGAGATTGGTGAGCTGTTTATTGTTGGAAAACCCGACATGACAATAGTGGCTGTTGGATCTGATGTTCTGGATATATTCGAAGTCAATGATATTATGTCATCCAAAGGATGGCATCTGAATGCATTACAGAGACCCAACAGCATCCATATCTGTGTGACACTGCAACATGTGCCAATTGTTGAAGATTTTCTCAAGGATTTGAAGGAATCTGTGAAAACTGTGAAAGAGAATCCAGGTCCAATAAGTGGAGGCCTAGCACCTATATATGGTGCCGCAGGGAAGATGCCAGATAGAGGCATGGTCCAGGAATTGCTGGTAGATTATATGGATGGTACCTGTTAA 1584 0.4261 MDSSSSSCPISHLRASANSFLSKYEPLGLVLAPLLSLLLAHALRSFFRLLSDNGLKATLIGFLMNTVKLLPGVKRYIDAEKQKVVDKMQSDGKSKREGWKTELPSTGLGTSVLEKMREEKINDAVWQGKCSGTVYIGGSETDGHFSLINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAALLGSKEKSSGGQICGNMTSGGTESILLAVKSSRDFMKSKKGITRPEMIIPESGHSAYDKAAQYFNIKLWRVPVNKIFQADVKAIRRHINKNTILIVGSSPGFPHGVIDPIEELGHLALSFGICFHVDLCLGGFVLPFARELGYHIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAAGSRPGSLIAGAWAAMMSLGKEGYLENTKAIMEGSRRIQKGIEEIGELFIVGKPDMTIVAVGSDVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVPIVEDFLKDLKESVKTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDYMDGTC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0165 527 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 21 527 - -
Aed3g0165 527 Gene3D - 138 391 IPR015421 GO:0003824
Aed3g0165 527 PANTHER - 21 527 - -
Aed3g0165 527 SUPERFAMILY PLP-dependent transferases 76 490 IPR015424 -
Aed3g0165 527 Pfam Pyridoxal-dependent decarboxylase conserved domain 157 430 IPR002129 GO:0016830|GO:0019752|GO:0030170
Aed3g0165 527 Gene3D - 101 524 - -
Aed3g0165 527 Gene3D Aspartate Aminotransferase, domain 1 110 490 IPR015422 GO:0003824
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0165 157 487 Calmodulin-binding Proteins AT3G17760 26.431 3.86e-21 94.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0165 3 1187690 1194763 Aed3g0165 3 1187690 1194763 ECH