Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0153 ATGGAGTCCAAACAAGAAGCACCAAGTGTTATTTTAAACTTGATGGGTCTTGATAAAGTGCCTACCCAACATCCTGTTAGAGATAAACAGAAAGTGCTCTCTGAGAACTACCTGCAGAAAGTTGCCTCTATTGGTGTCAGAAAGAAGCGTTCATCTCATCAGCATCATTCCTCTGGAATGAATACCAATGAAAAGGAAGATTCTGAGGATGTTTTAAAAGTGGTTAAAGCACTAAGGCGAGGTAAACACCATAACCCATCAAAGGGAAATGGGAAAGAGAATCCTAGTTCTTGCAAAAATTCTCATTTGCCTGATGGGCTGCTCCGAGAGATATTTTATCCTAAAAGCATGAAAGTATATCCTGAAATGAGGGAGACAAAGAAAATATCCTATCACGTGAATTCTGGTAAGCAGAGTTCAAGGCCTTTCAGTAAAATTTCAGAGGAGATTCCTATGCAATCAGGAAATGTTGCAAATGGAGTTTTAGATACTGCCTCAAGTTCATTTTTCAGAGGGAATGAAGCATTTGCCAATGATATGCTGAAGCTTGCTTTAAATATTTCAGTTAATGAGATCAAATGCAATGCCCCTTTCTTCTGTTCTGATGCAAGGACCAAAACTTTGGCACAGGGACATGTGACTGAAAAATTGCAAAAACATGGACGGTGGGGTCAAGACTGTATACACAACCAGTTGCCTATGATGTATGAACATGGAAATGGAGCAACAAATTTGACTCATCAAAATGATTATCGTAATCATAAAGTTAAAAGAAACATTAGATGTAAGGCTGGTGTTAATTATAGCTTTGCTAGAAGAGTGTCAATACCTCTTTGTGCAGCTTCAGTTATTGCTGATGATTGTGGAACTGTGAATCAGGATATCTTGTTTCAGAGATATTGGGGTTTGAGAAAGAATGCATCTGCAAATTGGTTATCATGGAAGTCGAAGAATCAAAATGTTAACCAGAAAGAATGTTTGGAAGATTTGAACCTCAGTCCTGGACATGAGAAATTCCCTTCACTTTCCTCTTATTTCACTAGTAATCAGACTAAAGAGAATTGTATAGGTCATACGTCAGAGAAGACATGTTATGGGAAGGATTTGTTTGATAAGGTAACTGTGCCTCCTCAATTGTCAAGTACTAGTCCTTCTCCTGTCGTCTTGATAGACAGTCAGATATTGCATGAAAGATGTTTAATGAATGATGAAGTGAACAACAAAATGTATGAAGAGAGTAGTATGTCTAAGCAAAATGTTGTGTCTCCATCAGTTGAATTCTTGGTATCTGATGCAAAGAATGAGGTTGATGACAGGTCACATAATAATCCAATCAAGCATCAATATAAATCAACAGCCTTCATTTTGCAACAAGCAATTGATTCTCTGAGTCATACTTCATATGCTTCAAAGCAAGAGGATACATTAGACTTTCAAGAAGATTCTGTTCATTCACTTTGCTCTGAGGCTGACCCAGATTCCCTTGGTAGCTTTGAGGAGGCATATGAACCTAGTCCAATTTCAGTTTTGGATCCCTTATTTAGAGAAGACATTCGATTCAGCTCTAAACATGATTCCTCTGAAGTGGATGATGAAGAATATGGTTTGAATGTTTCAAGTGATGAAGACTGTGAGAATGAATCTATAGGTGACTCTGAAAAAAAGGAAGAAATAGCAGGATTGTTTAAAGCTGAAGAATGTAGAGATTTCTCATATGTTGTTGAGGTCTTAACCGAGGCAGGTATATGTAATAGCAGCTTGTTTACAGACTCTTCTACATGGCACTCTACAGAATGTCCTATTAGCCCTTGTGTCTTTGAAATCATGGAAAAGAAATTTGGTGAGCAGCAACTTTGGAAGAGACCTGAAAGGAAACTTCTCTTTGATCGCATTAACATAGGGCTGCTAGAGATTATGCAGCCATATTTGTATGTGCCAATGTGGGAAAAGCCCATGTCAAGAAGGATGAATGCTGAACCAAGCCAGGACATGATTGAGGAAGAGATATGGGGGTTGCTTGTTGCACAGGAAAAGAAAGCTGGTAAAGGGTTAGGAGATGGTATGCTAGGAGGGGAGATTGGGTGGATAGAACTAGCTGAAGATGTTGAAGATATTGTTAGAGAGATAGTGAAGTTGTTAATAGAGGAGCTTGCAAACGAGATAGTTAGCTTGGAGAGTTTTTGA 2184 0.3846 MESKQEAPSVILNLMGLDKVPTQHPVRDKQKVLSENYLQKVASIGVRKKRSSHQHHSSGMNTNEKEDSEDVLKVVKALRRGKHHNPSKGNGKENPSSCKNSHLPDGLLREIFYPKSMKVYPEMRETKKISYHVNSGKQSSRPFSKISEEIPMQSGNVANGVLDTASSSFFRGNEAFANDMLKLALNISVNEIKCNAPFFCSDARTKTLAQGHVTEKLQKHGRWGQDCIHNQLPMMYEHGNGATNLTHQNDYRNHKVKRNIRCKAGVNYSFARRVSIPLCAASVIADDCGTVNQDILFQRYWGLRKNASANWLSWKSKNQNVNQKECLEDLNLSPGHEKFPSLSSYFTSNQTKENCIGHTSEKTCYGKDLFDKVTVPPQLSSTSPSPVVLIDSQILHERCLMNDEVNNKMYEESSMSKQNVVSPSVEFLVSDAKNEVDDRSHNNPIKHQYKSTAFILQQAIDSLSHTSYASKQEDTLDFQEDSVHSLCSEADPDSLGSFEEAYEPSPISVLDPLFREDIRFSSKHDSSEVDDEEYGLNVSSDEDCENESIGDSEKKEEIAGLFKAEECRDFSYVVEVLTEAGICNSSLFTDSSTWHSTECPISPCVFEIMEKKFGEQQLWKRPERKLLFDRINIGLLEIMQPYLYVPMWEKPMSRRMNAEPSQDMIEEEIWGLLVAQEKKAGKGLGDGMLGGEIGWIELAEDVEDIVREIVKLLIEELANEIVSLESF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0153 727 PANTHER AFADIN 1 86 - -
Aed3g0153 727 PANTHER AFADIN 86 727 - -
Aed3g0153 727 PANTHER DUF4378 DOMAIN PROTEIN 1 86 - -
Aed3g0153 727 PANTHER DUF4378 DOMAIN PROTEIN 86 727 - -
Aed3g0153 727 MobiDBLite consensus disorder prediction 532 547 - -
Aed3g0153 727 MobiDBLite consensus disorder prediction 524 550 - -
Aed3g0153 727 Pfam Domain of unknown function (DUF4378) 569 720 IPR025486 -
Aed3g0153 727 MobiDBLite consensus disorder prediction 59 76 - -
Aed3g0153 727 MobiDBLite consensus disorder prediction 43 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0153 Aed-Chr3 1124414 1128622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0153 463 724 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.010 2.47e-34 135