Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0149 ATGGAGATAACCTACGCATCGCCAAGCTTCTCCGACCTCCGCGCCGTTGCTTCCCCCTCCACCATGCCGACCTCCGCTCGTCCCGTCAGGATCATTCCCCTGCAGCACCCGACCGCCACGACGTCGTCGCCGCCGAACTTCGCTTTCGCGCGCTGGACCGCGAGGCTCCGGCGAATGACGTGGCTCGAGTGGATCGAGTTCTTCCTCCCTTGCCTCCGCTGGATTCGCATCTACAAATGGCGCGAGTATTTCCAGGTTGATCTCGTGGCCGGAATCACCGTCGGCGTCATGCTCGTTCCCCAGTCGATGTCGTATGCAAAATTGGCTGGACTTCAACCGATATATGGACTCTACGCTGGTTTTGTGCCACTATTTGTATATGCCATATTTGGGTCTTCTCGCCAGCTGGCAGTAGGTCCAGTGGCATTGGTTTCTCTCTTGGTCTCGAATGTGCTAGGTAGCATAGCTGATTCATCCGGTGAATTATACACAGAGCTGGCAATATTACTGTCCTTTATGGTTGGGATAATGGAGTGTATAATGGGACTCTTGAGGCTTGGATGGCTTATTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTGCTTCAGCTATTGTCATTGGTTTATCTCAAGCAAAATACTTCTTGGGGTATGATATCGATGGAAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAGCTGGAGCAGATAAGTTTTCATGGCCCCCTTTTGTGATGGGATCCATTATGCTTGCAATACTACTTGTCATGAAGCACCTGGGAAAAACCAGGAAGCATTTGCGATTCTTGAGAGCTTCAGGTCCTCTTACAGCAGTAGTTCTGGGAACACTTTTTGCAAAAATATTTCGCCCATCATCAATTTCTTTGGTGGGAGATATACCTCAAGGCCTACCAAAATTTTCTGTTCCAAAATCTTTTGAGTATGCACAGTCCTTAATTCCAACTGCTCTTCTCATAACTGGTGTGGCTATACTGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTTTTTTCAGCGTACCCCACAACAGGATCCTTTTCAAGGTCGGCTGTAAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGGGATTGTTTCAGCAATTATAATGACATGTGCACTTTTGTTTCTAACACCATTATTTGAGTACATACCTCAGTGTGCCCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGAGGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATTGAGATTGGCGTCCTTGTTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGGAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATCGTTCGTGTTGATGCTCCAATTTATTTTGCAAACACAAGTTTCATAAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATAGTTCTACAAGACGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTTTAGAGATGGCACCTGTGACCTACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGAGTTGTATCAGGAATACAAATTACGGGACATTCAGATTGCAATATCAAATCCTAGCCCAGACGTTCTGCTTACCTTGTCTAGATCCGGTCTGGTGGAGTTGATAGGCAAAGAATGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAACATGTTCAGAGCTTGAAAGGGGGATCTAACAGTCCGTTACTAGAAGACAAACCAAGTTTCTTTTCGCGATTATCGAAAGAGAGAGGGGAGAAGCAGCTTTCAATTACCACCGACTTGGAGTCTGGTGGTAATGGCAGGCCTCCACTCCCCATCCCCAAGGACAAGGAGAGCGATTCCCAATCAGAGCCATTGTTGTCTAAAGAACGTTGA 2043 0.4493 MEITYASPSFSDLRAVASPSTMPTSARPVRIIPLQHPTATTSSPPNFAFARWTARLRRMTWLEWIEFFLPCLRWIRIYKWREYFQVDLVAGITVGVMLVPQSMSYAKLAGLQPIYGLYAGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGSIADSSGELYTELAILLSFMVGIMECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDIDGSSKIIPVVKSIIAGADKFSWPPFVMGSIMLAILLVMKHLGKTRKHLRFLRASGPLTAVVLGTLFAKIFRPSSISLVGDIPQGLPKFSVPKSFEYAQSLIPTALLITGVAILLFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSAIIMTCALLFLTPLFEYIPQCALAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLVGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSFIKDRLREYEVDVDSSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKELYQEYKLRDIQIAISNPSPDVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKGGSNSPLLEDKPSFFSRLSKERGEKQLSITTDLESGGNGRPPLPIPKDKESDSQSEPLLSKER 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0149 680 Gene3D STAS domain 465 613 IPR036513 -
Aed3g0149 680 ProSiteProfiles STAS domain profile. 485 609 IPR002645 -
Aed3g0149 680 MobiDBLite consensus disorder prediction 662 680 - -
Aed3g0149 680 SUPERFAMILY SpoIIaa-like 487 609 IPR036513 -
Aed3g0149 680 Pfam STAS domain 486 605 IPR002645 -
Aed3g0149 680 MobiDBLite consensus disorder prediction 638 680 - -
Aed3g0149 680 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Aed3g0149 680 PANTHER SULFATE TRANSPORTER 4.1-RELATED 336 639 - -
Aed3g0149 680 PANTHER SULFATE TRANSPORTER 4.1-RELATED 38 335 - -
Aed3g0149 680 Pfam Sulfate permease family 336 435 IPR011547 GO:0016021
Aed3g0149 680 Pfam Sulfate permease family 84 335 IPR011547 GO:0016021
Aed3g0149 680 CDD STAS_SulP_like_sulfate_transporter 486 602 - -
Aed3g0149 680 PANTHER SULFATE TRANSPORTER 336 639 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed3g0149 680 PANTHER SULFATE TRANSPORTER 38 335 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0149 Aed-Chr3 1098903 1107121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0149 3 634 Inorganic Solute Cotransporters AT5G13550 70.465 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0149 K18059 - gmx:100794754 1180.62