Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0146 ATGGTGGGGAACGACGACCCGGGCCACCTCTCCGCCTCCCGGAAAATGTTCTGGCGGTCGGCGTCGTGGTCCTCCTCGCGCACCGCCGCCGGAAACGCCTCTTCCGGCGAGGCGGAGAAGAGTTTCCCCGATTCCGGCGGCACCGACGGTCCACACGGCCGGAACCGGCGGTTCCCTCCTCCGCCGCTGACGCCTCGGTCGCAGCAGAATTGCAAGGCGCGGTCGTGCCTGCCGCCGCTGCAGCCGCTCTCCATCGCCCGGCGGAGCCTCGACGAGTGGCCGAAGGCGGGCTCGGACGACATCGGGGAGTGGCCGCAGCCGCCCACCACTCCCAGCGGGAGAGGTAATGGTAGCAATGGTGAAAGGTTGAAACTTGATTTGTCTTCCATTCAGCATAACAACCCTGATCATAGTAGGTGTAACAATGGAAATGGGCTTGTCAAGAGGGATAAGATTGCATTTTTTGATAAGGAGTGTTCAAAAGTTGGTGATCATGTGTACCTTGGTGGTGATGCTGTTGCTAGGGATAGGGGCATTTTGAAGCATAATGGTATCACTCATGTGTTGAATTGTGTGGGGTTTGTGTGTCCTGAGTACTTTAAGGCTGACTTTGTTTATAGGACTTTGTGGCTGCAGGACAGTCCCTCTGAGGACATTACTAGTATCTTGTATGATGTGTTTGACTACTTTGAGGATGTTAGGGAGCAAGGTGGGAGGGTGTTTGTGCACTGTTGTCAAGGGGTGTCTAGGTCTACCTCTTTGGTCATTGCTTACCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTTTGTGAAGGCAGCGAGAGGAATTGCTGATCCGAATATGGGATTTGCTTGCCAGCTGCTGCAGTGCCAGAAGAGGGTTCATGCTGTCCCTCTTAGCCCTAGCTCTTTGCTGAGGATATATAGGATTGCTCCACACTCGCCTTACGATCCTTTGCATCTTGTTCCCAAAATGTTGACAGATCCTTCATCGGCTGCGTTGGACTCCAGAGGTGCTTTTGTCGTGCACATTCCTTCGGCGATATATGTTTGGATTGGTAAGAATTGTGAGGCCATCATGGAAAGGGATGCCAGAGGGGCTGTTGGTCAGATTGTCCGGTATGAGAAGGTGCAAGGACCTATTGTGATGATTAAGGAAGGTGAGGAGCCGGCTTACTTTTGGGATGCTTTTTCAAAGTTCTTGCCCTTGATGGACAAATCTGGTAATAGAGCAGATGATAGCAAATTATTAACTATTAAAGTTTTGCCTGGTGAGAGGAGAGTGGATGCATATAATGTTGATTATGAAGTTTTCAAAAAAGCAATCACTGGAGGCTTTGTGCCTCCATTTGCTTCATCAGGTGAACATGAAACCCATCTGCCTGCAAGAGAGAGTAGTTGGAGTGTTTTAAGGCGTAAAGTTTCCCCTGCTAATACAAAGGAGTTTGTTTTGGCCCCTAGGTTATCCTTTCCAAGGGTTTATTCAGATTCCATGTTGTGTATTCATACATCAGCAAATTTGTCTCCATCCTCATTGCTGTCGTCATCTTCATCATCCTCTTCACTGTCTTTTGTTTCTCCAGATTCCATTTCTTCTAATTCTAGCACTCATTCAAAGTTTTTGTCAGAAGTGTCCCCAGATTCTTCCTCCGTGGTTTTGACCCCTATTCCCGTGTCTTCATCTTTGTCTAATTTTTCCAATTTGTCAATCTCATCTAATTCTACTTCTCAAACAGTGTCTAACAGTACGGATATCCTTGGTGTCAAGTTATCAAATCCCTGGTCTCAGTCAGCCTCTTTACCATTGAAAAAACCACCAACATCCCTTGCTGAACGCAGAGGTAGTTTGTCAAAATCTTTGAAGTTGCCGCTGATGAATGATAAAACAGAAGTAAAAGATAAAAGCTTGACTTCTCATTCTAGTCGAGAATATGACATTCTTGTTAATGGCAACATTAGCTATTTGCAACAATCAGGCAATAAAGATTATTCTTGTGAGTCTAACAATCATGCCAAGGGTGGAGGTGTGAGTTCAATTCAAAAGTGTGAGCTGGCATTATGTCCAAGCATTGTTGACAACATGCACCTCAAGGAATCATCACTTAGTCAGTCTACAGCATTGCAGGGAACTAATGAGAGTGGCTTACTGCAGTATAATGTTGCCCAAACTTCGGTATATCACTGGCCCAGTTTAGAAAAGATTGAGACATTTGGTGCAAGTCATTTGGATTCTAAAGCTGCTTTTGTCATATTCTCTCCCAGTATGCATGTTCATGCGGGGAACATATTATATATTTGGGTAGGGAGGTCTTTCAATTGTGACGCTTCACAAGTTCACTTAGATATTGATAAACAGTCAGATTATCAAGGAGCTGTTGACTGGAATCGAATTGGTTGTGATCTCCTTGCTCAGTTTAGTTTGCCAAAGAACACAGTCATGAAGGTTGTTAAAGAGAATAAAGAACCTTCAGAGTTCCTTGCTTTGCTGAGCTCTAATTTGATCTTCCCTGTGAAAAGAAATCCAGTGAGGAGGTTGCCCCATGCCAAGTCAATTGTAGCTCGGCTGATTGTACAGTACTTTAACACCCTCAACTTAGAAATTTATGTTCAATTTACCGAAATTTCTTTCACATTTCTCATGTTATTATTATTTATAAAGAAACAATTCCTTCTTAGCTCTATTTCATATTCTCTCTCTCAATGCGGAAAATGTTGA 2727 0.4507 MVGNDDPGHLSASRKMFWRSASWSSSRTAAGNASSGEAEKSFPDSGGTDGPHGRNRRFPPPPLTPRSQQNCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTTPSGRGNGSNGERLKLDLSSIQHNNPDHSRCNNGNGLVKRDKIAFFDKECSKVGDHVYLGGDAVARDRGILKHNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRIYRIAPHSPYDPLHLVPKMLTDPSSAALDSRGAFVVHIPSAIYVWIGKNCEAIMERDARGAVGQIVRYEKVQGPIVMIKEGEEPAYFWDAFSKFLPLMDKSGNRADDSKLLTIKVLPGERRVDAYNVDYEVFKKAITGGFVPPFASSGEHETHLPARESSWSVLRRKVSPANTKEFVLAPRLSFPRVYSDSMLCIHTSANLSPSSLLSSSSSSSSLSFVSPDSISSNSSTHSKFLSEVSPDSSSVVLTPIPVSSSLSNFSNLSISSNSTSQTVSNSTDILGVKLSNPWSQSASLPLKKPPTSLAERRGSLSKSLKLPLMNDKTEVKDKSLTSHSSREYDILVNGNISYLQQSGNKDYSCESNNHAKGGGVSSIQKCELALCPSIVDNMHLKESSLSQSTALQGTNESGLLQYNVAQTSVYHWPSLEKIETFGASHLDSKAAFVIFSPSMHVHAGNILYIWVGRSFNCDASQVHLDIDKQSDYQGAVDWNRIGCDLLAQFSLPKNTVMKVVKENKEPSEFLALLSSNLIFPVKRNPVRRLPHAKSIVARLIVQYFNTLNLEIYVQFTEISFTFLMLLLFIKKQFLLSSISYSLSQCGKC 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0146 908 Gene3D Protein tyrosine phosphatase superfamily 131 300 IPR029021 -
Aed3g0146 908 SMART dsp_5 158 297 IPR020422 GO:0006470|GO:0008138
Aed3g0146 908 Pfam Dual specificity phosphatase, catalytic domain 166 296 IPR000340 GO:0008138|GO:0016311
Aed3g0146 908 MobiDBLite consensus disorder prediction 599 619 - -
Aed3g0146 908 ProSiteProfiles Dual specificity protein phosphatase domain profile. 158 300 IPR020422 GO:0006470|GO:0008138
Aed3g0146 908 Gene3D Severin 321 405 IPR029006 -
Aed3g0146 908 SUPERFAMILY Actin depolymerizing proteins 736 838 - -
Aed3g0146 908 MobiDBLite consensus disorder prediction 94 122 - -
Aed3g0146 908 SUPERFAMILY Actin depolymerizing proteins 305 408 - -
Aed3g0146 908 CDD DSP 159 293 - -
Aed3g0146 908 PANTHER MKPA PROTEIN 1 830 - -
Aed3g0146 908 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 830 - -
Aed3g0146 908 MobiDBLite consensus disorder prediction 19 78 - -
Aed3g0146 908 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 217 278 IPR000387 GO:0016311|GO:0016791
Aed3g0146 908 MobiDBLite consensus disorder prediction 19 41 - -
Aed3g0146 908 ProSitePatterns Tyrosine specific protein phosphatases active site. 242 252 IPR016130 GO:0016311|GO:0016791
Aed3g0146 908 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 152 299 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0146 Aed-Chr3 1067767 1073058 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0146 2 194 Protein tyrosine phosphatase (PTP) family AT3G55270 62.564 1.19e-66 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0146 - - gmx:100790177 1416.75