Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0145 ATGAAGAAAATTGAGGATAACAACACACTGGTTTTTATTGTTGACCTCCGTGCTGACAAAAAGAAGATTAAAGATGCTGTAAAGAAGATGTATGACATTCAGGCGAAGAAAGTGAATACTTTAATCAGGCCAGATGGAACAAAGAAAGCCTATGTTAGGTTGACGCCAGATTATGATGCCTTGGATGTAGCCAACAAGATTGGTATCATCTAA 213 0.3756 MKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0145 70 Gene3D - 1 70 IPR012677 -
Aed3g0145 70 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 70 IPR013025 GO:0003735|GO:0005840|GO:0006412
Aed3g0145 70 Pfam Ribosomal protein L23 2 53 IPR013025 GO:0003735|GO:0005840|GO:0006412
Aed3g0145 70 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 70 - -
Aed3g0145 70 ProSitePatterns Ribosomal protein L23 signature. 48 63 IPR001014 -
Aed3g0145 70 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 63 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0145 Aed-Chr3 1061539 1066937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0145 1 70 Cytoplasmic Ribosomal Protein Gene Family AT3G55280 97.143 4.15e-43 134