Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0138 ATGTCTTATCAGCATAAAAGCTTTTGGATGCCACGGGATGCTGGCTGCATTGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATATTCAGCAATAAGAAACAAGCGGTTGAAGCTGTTAGTGGCAGGCCAATTTCAGGAGTTTCACATGTGAATGTTTCCCAATGGGACACCAATTCAGGATTTCACTCAGTCACAGGCCAATTTTCTGACCGTCTCTTTGGATCTGATCTTCCAAGGACTGTGAATTTGGTTGATAAAAACATGCCATCTATTGTAAGTGGAAATCTGAACATGGGAAGGAAGGATTTTGAGCATCAATATGGTAATGATCCTTCTGTGGGATTGTCAATATCTCATTCCGTAGCAGACCCTTCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAACTGCATGCCTGCTGCATCCATGGGACACTCCTATAGTAGGGAAGATAATAGTACAGTTTCAGTAGGTGCTGTCTACAATAAGAATGATCGCAATATTTCATTGGGTCCTACTTATAACAATGGAAATGACAACACTATTGCTATGGGGACCAGAATGAGTAAGACTGATGACAATCTTCTTTCAATGGCTCACACTTTCAATAAAGGTGATGGGGGTTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGAGAAGGGAGATGGAAATTTCATATCAATGGGTCAATCATATGATAAGGAAAATGGCAACTTAATATCTCTGGGCACCTCATATACCAAGGGGCACGAGAGCTTTATCTCAGTTGGTCCAACCTATGGTAAATCAGGAGAAAATTTCATAACTGTTGCTCCTTATGACAAGGGTACTGATCATATAATATCAATGGGTCCAACATATGATAAGGTGGATTCAAATATTGCATCAACAGTTCCATCATATGACACAGGAGATTCTAGTTCTTTACCTGTGGGTCAAAACCACCATAAGGGTCAGGGCAGTACCATATCTTTTGGAGGTTTTCAGGATGACCATGAATCGAATCCCTCTGGTGGAATCATTTGTGGCTATGACCTGTTGATAGGAAGCCAGAACTCAGCTCAAGGTTTGGATAGCCAGAACGATCTGACTGAGTCAAACACCGAATCACTTGTAAATAGCATTCCAAAACCCAATACTAAAAATGATATTGTTAAGAACAAAGAGCCAAAGACAACCAAGAAGGCTCCTACTAACAACTTCCCTTCAAATGTCAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGAAAAGTCTTAAAGGAATTATAAAAGGAACTGGGTATTTGTGTTCATGTGACGACTGCAAACAGTCAAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCTAACAATCACATATACTTTGAGAATGGGAAAACCATCTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATACTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTCCAAAAATGGAAAGGTAACCAAGAATTTTCAGTTTGCTTGGTTGTGGTTAAGAACACCTGGATGATCATGTCTTTGCTTCAATTATCCATGCTTAGATACAAAAACAACACAAATTCTTTAATCTTTTCTACTTCTAATATATTTTCCTCCTTATCAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATCTATGGAAAGGATGAAGTGATCATTCCGTCTTGA 1887 0.3959 MSYQHKSFWMPRDAGCIAEENVGYENSSRIEPKRSHQWFMDTGEPEIFSNKKQAVEAVSGRPISGVSHVNVSQWDTNSGFHSVTGQFSDRLFGSDLPRTVNLVDKNMPSIVSGNLNMGRKDFEHQYGNDPSVGLSISHSVADPSSCLNFGGIRKVKVNQVRDSDNCMPAASMGHSYSREDNSTVSVGAVYNKNDRNISLGPTYNNGNDNTIAMGTRMSKTDDNLLSMAHTFNKGDGGFMLMGHNYGKGDESILSMGQPFEKGDGNFISMGQSYDKENGNLISLGTSYTKGHESFISVGPTYGKSGENFITVAPYDKGTDHIISMGPTYDKVDSNIASTVPSYDTGDSSSLPVGQNHHKGQGSTISFGGFQDDHESNPSGGIICGYDLLIGSQNSAQGLDSQNDLTESNTESLVNSIPKPNTKNDIVKNKEPKTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREKSLKGIIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEILFDAIQNVTGSTINQKNFQKWKGNQEFSVCLVVVKNTWMIMSLLQLSMLRYKNNTNSLIFSTSNIFSSLSASYQAATRELQRIYGKDEVIIPS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0138 628 Pfam Tify domain binding domain 473 528 IPR032308 -
Aed3g0138 628 MobiDBLite consensus disorder prediction 398 422 - -
Aed3g0138 628 PANTHER AUTOIMMUNE REGULATOR 1 628 - -
Aed3g0138 628 MobiDBLite consensus disorder prediction 342 371 - -
Aed3g0138 628 MobiDBLite consensus disorder prediction 398 441 - -
Aed3g0138 628 PANTHER N-LYSINE METHYLTRANSFERASE 1 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0138 Aed-Chr3 1012272 1017100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0138 432 559 PHD Transcription Factor Family AT3G53680 56.250 4.10e-41 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0138 - - gmx:100782217 1077