Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0134 ATGAGTCGCTGGTTACCAACAGTGGCAATAGTGGCTTTCCAAACAGCATATGCAGCTGTTACAGTCATAATCAATATGAATTGTTACAAAAGAGCCACAACCTACAACCTACAAGTGCCAAACATGTCAGAAGCTAGTCCTTATTCCATTGATATTACAAAAATGAAAAATGCTCTTCTATCATCAGTTTCTTCAAGGCTTCACTGTGGAAACGATGAGGCTCAGTTTGAAATTTTAGAGGGCTCCATGCAAATGAACGATCAAAATGACTTCCGTAGCAATGGCTTCAACATGGAGTCTAGAATATTCAACAATGACGACAGCCAATTGGGTCAAGGAATCCATGCACAGCCTAGCCAGTCTCAGTCTCAGTCTCTGTTTTATGACTACAATCATTGCCCAGGTAGTCTCTATGCCATCCCAAACAGCAAAGACATTTCCCCGCAATCATTGTTACTTGACAAAGACCCTTCTCAATATGAAGGAGTATGTGGAAATGACAGAAAACGTCCATTTGATTACGATGACAACGTGTCCTTGTGGAAAAAAATGAAAAGCAATTCCAAGGAACCGAAATGGCATCAAGCAAAAGAAGATTCAGATGTAATCCCTCCGATCAAATTGCATGTGCCTATGAGGACAAATCAGAAGCTTAGCGACAAAATAACAACTCTGCAAAAATTGGTTTCACCTTTTGGCAAGACTGACACCGCCTCAGTTCTTCATGAGGCTTCTCTTTATATCAAGCTTCTTCAAGCACAAGTCCAGACTTTGTTTCAGATGCTGAGCTTCTCTTACTTTAGTGCGATTAAAGATCCCCATACTCAGGAATGTGGGGACAAATTGCAGGTTGACCTAAGGAGCAGAGGACTTTGTTTGGTTCCCGTATCAATCACAGAGAAAGTAACAATGGTAGACCAGATTCATCATGCTCCGGCCTCAAGAATTATTCACTCCTGA 960 0.4135 MSRWLPTVAIVAFQTAYAAVTVIINMNCYKRATTYNLQVPNMSEASPYSIDITKMKNALLSSVSSRLHCGNDEAQFEILEGSMQMNDQNDFRSNGFNMESRIFNNDDSQLGQGIHAQPSQSQSQSLFYDYNHCPGSLYAIPNSKDISPQSLLLDKDPSQYEGVCGNDRKRPFDYDDNVSLWKKMKSNSKEPKWHQAKEDSDVIPPIKLHVPMRTNQKLSDKITTLQKLVSPFGKTDTASVLHEASLYIKLLQAQVQTLFQMLSFSYFSAIKDPHTQECGDKLQVDLRSRGLCLVPVSITEKVTMVDQIHHAPASRIIHS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0134 319 PANTHER TRANSCRIPTION FACTOR BHLH112 77 305 - -
Aed3g0134 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 251 IPR011598 GO:0046983
Aed3g0134 319 CDD bHLH_AtbHLH_like 216 258 IPR045239 -
Aed3g0134 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 77 305 - -
Aed3g0134 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 262 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0134 Aed-Chr3 975711 980251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0134 182 297 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 44.000 3.43e-19 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0134 - - ccaj:109812405 397.127