Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0133 ATGGTGAACGTGATGGAGTGGCAGAAGCAGCAGCGTTGGCAACCGAACGAAATGATGTACGTGAAAGTGATGACGGACGAACAACTCGAAACTTTGCGCAAACAGATTGCGGTCTACGCAACCATCTGCGAACAACTCATCGAGATGCACAAAACCATCTCTTCTCACCAAGATCTCACAGGGATTAGGCTGGGCAGTATGTATTGTGATCCATTGTTGGGGTCAGGTGCGCACAGAATAGCTTCAAGGCAGCGGTGGACTCCAACGGCTATGCAGCTTCAGATTCTGGAGCGGATATTTGATCAGGGGACTGGGACTCCCACCAAGGAAAAGATCAAGGAGATCACTACTCAGCTCAGCCAGCATGGCCAGATTTCTGAGACCAATGTGTATAATTGGTTCCAGAACAGGCGGGCTCGCTCCAAAAGAAAGCAGCAGAATGTGTCCCCTAGCGTTAATGCTGAATCAGAAGTGGAGACTGAGGTTGATTCTAAGGATAAGAAGACTAAGCCAGACGAGTTTCAGTCCCTGCCTAGCGTTTCTGCTGGGCCTGCTGATAATTTAGGCTTCCAGAACCATGATAATTTGCAGTACTTGAATCCAGAGTCCAACAAACCAGGTTCTGTGTTTCCATCTGATGGGAGTTTAAGAGACACTAGAAATTTCAACCATGTGCCTGTTTTTGACGGGCTGCTATCAAACTCGAGGAGTGACTATCTTACTGGAAAAATGGAAGCACCTGAGAACTACGACTTATATGAGCCAGCAGGTGACTACAACATGGCGGGTTGA 792 0.4785 MVNVMEWQKQQRWQPNEMMYVKVMTDEQLETLRKQIAVYATICEQLIEMHKTISSHQDLTGIRLGSMYCDPLLGSGAHRIASRQRWTPTAMQLQILERIFDQGTGTPTKEKIKEITTQLSQHGQISETNVYNWFQNRRARSKRKQQNVSPSVNAESEVETEVDSKDKKTKPDEFQSLPSVSAGPADNLGFQNHDNLQYLNPESNKPGSVFPSDGSLRDTRNFNHVPVFDGLLSNSRSDYLTGKMEAPENYDLYEPAGDYNMAG 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0133 263 MobiDBLite consensus disorder prediction 140 215 - -
Aed3g0133 263 Gene3D - 84 149 - -
Aed3g0133 263 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Aed3g0133 263 Pfam Homeodomain 83 143 IPR001356 GO:0003677
Aed3g0133 263 MobiDBLite consensus disorder prediction 158 173 - -
Aed3g0133 263 SMART HOX_1 81 148 IPR001356 GO:0003677
Aed3g0133 263 MobiDBLite consensus disorder prediction 174 215 - -
Aed3g0133 263 PANTHER - 3 262 - -
Aed3g0133 263 CDD homeodomain 83 145 IPR001356 GO:0003677
Aed3g0133 263 SUPERFAMILY Homeodomain-like 81 147 IPR009057 -
Aed3g0133 263 PANTHER WUSCHEL-RELATED HOMEOBOX 13 3 262 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0133 Aed-Chr3 972318 975845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0133 19 263 Wox Gene Family AT4G35550 52.610 4.23e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aed3g0133 Homeodomain 7.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0133 - - gmx:100784355 469.544