Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0126 ATGGATAGTATTGCCATAGCTTCATTTGGGGCAATCAAGAAAGGGGTTTTTGTTGCTTGTTCCGCAGGCAATTCAGGCCCCTTTCCATCAACAGTTGGAAATGGTGCTCCATGGATCATGACAGTTGCTGCTAGCTCCACTGACCGAAGCTTTCCAACAAAAGTAAAGCTTGGGAATGGAAAAACCTTCAAAGGGTCATCTTTATATCAAGGTAAGAAGACAAACCAATTGCCCCTTGCGTATGGAAAATCCGCAGGTGTAAATAAGGAAGCACAGTATTGCATTGGAGGCTCCCTTGATCCAAAGCTTGTACATGGGAAAATAGTTGCTTGTGAAAGAGGAATAAATGGTAGAACCGAGAAGGGAGAGGAAGTGAAAGTGGCTGGTGGGGCAGGAATGATACTACTCAACAATGAATATCAAGGAGAAGAGCTTTTTGCTGACCCTCATATTTTGCCAGCCACTTCCTTAGGGGCTTCAGCAAGTAAAATTATTAGAAGCTATAGTGAATCTGTTAAAAAACCAACAGCTTCAATTTCCTTTATGGGGACAAGGTTTGGTGACCCTGCACCAGTGATGGCAACATTTTCTTCTAGAGGACCAAACCTAGTGGGACCAGATATAATTAAACCTGATGTGACTGCACCTGGTGTGAATATCTTGGCTGCTTGGCCAACCAAAACTAGTCCAAGCTTTCTCATGAGTGATAAAAGAAAAGTACTATTTAACATACTTTCAGGTACTTCAATGTCTTGTCCTCATGTTAGTGGCATAGCAGCACTGCTCAAGTCTTTGCACAAAGATTGGTCCCCTGCAGCTATTAAATCTGCTCTCATGACTACTGCTTACACATTGAACAACAAAGGAGATCCAATTTCAGACATGGCCTCAAATAACTCACCATTTGCCACCCCCTTTGTATTTGGTTCAGGCCATGTTAACCCTGTAAGTGCTTCTGATCCGGGGTTAGTCTATGATATCAGCACCAAAGACTACTTAAATTATTTATGCAGCATAAACTATACCTCTTCTCAGATTGCTTTGTTATCGAGAGGTAAATTTATATGTTCTAAAAAAGCAGTTCTTCAAGCTGGTGACTTGAACTACCCTTCATTTGCCGTTCTATTTGGAAGAAATGCCTTAAATGCTAGTGTGGCATACAAGAGGGTTGTCACAAATGTTGGAAAACCCCAAAGTGGTTATGCAGTTAAAGTGGAACAACCAAAAGGAGTTTCAGTTACTGTTGAACCAAGGAAACTGAAGTTTGAAAAAGTGGGTCAGAAATTAAGCTACAAGGTGACATTTTTGGCAAGTGGAGGAGCAAGTGTTGCGGGTACCTCATCATTTGGGTCAGTGATTTGGGTATCTGGCAGATATAAAGTTAGAAGTCCTATGGCAGTGTCCTGGCAGTAG 1413 0.4183 MDSIAIASFGAIKKGVFVACSAGNSGPFPSTVGNGAPWIMTVAASSTDRSFPTKVKLGNGKTFKGSSLYQGKKTNQLPLAYGKSAGVNKEAQYCIGGSLDPKLVHGKIVACERGINGRTEKGEEVKVAGGAGMILLNNEYQGEELFADPHILPATSLGASASKIIRSYSESVKKPTASISFMGTRFGDPAPVMATFSSRGPNLVGPDIIKPDVTAPGVNILAAWPTKTSPSFLMSDKRKVLFNILSGTSMSCPHVSGIAALLKSLHKDWSPAAIKSALMTTAYTLNNKGDPISDMASNNSPFATPFVFGSGHVNPVSASDPGLVYDISTKDYLNYLCSINYTSSQIALLSRGKFICSKKAVLQAGDLNYPSFAVLFGRNALNASVAYKRVVTNVGKPQSGYAVKVEQPKGVSVTVEPRKLKFEKVGQKLSYKVTFLASGGASVAGTSSFGSVIWVSGRYKVRSPMAVSWQ 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0126 470 SUPERFAMILY Subtilisin-like 2 323 IPR036852 GO:0004252|GO:0006508
Aed3g0126 470 Gene3D Peptidase S8/S53 domain 2 332 IPR036852 GO:0004252|GO:0006508
Aed3g0126 470 ProSiteProfiles Serine proteases, subtilase domain profile. 1 319 - -
Aed3g0126 470 Pfam Subtilase family 11 293 IPR000209 GO:0006508|GO:0008236
Aed3g0126 470 ProSitePatterns Serine proteases, subtilase family, serine active site. 247 257 IPR023828 -
Aed3g0126 470 CDD PA_subtilisin_like 55 179 - -
Aed3g0126 470 Pfam Fibronectin type-III domain 366 467 IPR041469 -
Aed3g0126 470 Pfam PA domain 84 161 IPR003137 -
Aed3g0126 470 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 470 IPR045051 -
Aed3g0126 470 Gene3D - 48 186 - -
Aed3g0126 470 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 2 470 - -
Aed3g0126 470 Gene3D - 336 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0126 Aed-Chr3 921689 923101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0126 1 470 Subtilisin-like Serine Gene Family AT1G01900 57.203 2.69e-179 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0126 - - gmx:100790006 874.774