Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0116 ATGGCAATTGATCTGTCAAGGATCTCTGTCCGTGCATTCAATCCAATTAGTGATGTTGACGATGTACTGCAATGGTTGGGAGATGCTAGAGTGACTCAATACACACGATTAGAAACCTGTGGCTCCAGATCAGAGGCTTTGACATTCCTCAAAGATGAGTGTGTTCACCCTTTGCGCCGGTCAATATGCCTTGATGACCGTTCCATAGGGATTGTTTGGGTGCATCCTTATGCTGGTGATGAAAGGTACAAAGCTGACTTGGGGTATGCTTTAGGGGTCAACTATTGGGGCAATGGGATTGCCACCAAGGCACTCAAGATTGTTTTGACCCAAGTCTTCCACGACTTCCCTCACTTAAGGAGGTTGCAAGCTTTTACTTATTTGGACAACAAGGCTTCCCAGAGGGTATTGGAGAAGGTTGGGTTCCATAGAGAGGGAATAGTTAGAGATTTATATTTTAAGGGCAAGATTGATGATTTCTATATTTTTAGATTTTTGTCAACAGATCAAATTCTTGTCTAA 522 0.4291 MAIDLSRISVRAFNPISDVDDVLQWLGDARVTQYTRLETCGSRSEALTFLKDECVHPLRRSICLDDRSIGIVWVHPYAGDERYKADLGYALGVNYWGNGIATKALKIVLTQVFHDFPHLRRLQAFTYLDNKASQRVLEKVGFHREGIVRDLYFKGKIDDFYIFRFLSTDQILV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0116 173 Pfam Acetyltransferase (GNAT) domain 7 143 IPR000182 GO:0016407
Aed3g0116 173 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 1 171 - -
Aed3g0116 173 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 171 - -
Aed3g0116 173 Gene3D - 1 171 - -
Aed3g0116 173 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 167 IPR000182 GO:0016407
Aed3g0116 173 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 163 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0116 Aed-Chr3 864662 865183 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Aed3g0116 Acetyltransf_3 1.4e-20 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0116 - - gmx:100802886 320.857