Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0101 ATGGCCTTACAGAACATTGGTGCCGGTAACAGCGATGATGCCTTCTATAGGTATAAGATGCCTAAAATGATTACCAAAATTGAAGGCAGAGGTAATGGTATCAAAACAAATATTGTCAATATGGTTGACATTGCGAAAGCCTTGGCAAGGCCAGCTTCTTACACAACAAAGTATTTTGGCTGTGAGCTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAACGGGGCACATGAAACTACAAAACTTGCTGGCCTTCTTGAGATCTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTAATTACTAAGAACCAAATGATCCAGCTGAAATGTGCTGCTTGTGGGTTTGTGTCTGATGTTGATATGAGAGACAAGCTAACTACATTCATCATTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAAGAGAGAATGAAGGAAGGTGAATTGGCTGATGAGGAACAGAAGAAAGTGAAGAAAGAGGTTATTAAGAAGAAAGGAACTTCATCTTCGAAGGATGGGACCACAAAATCTACTACTTCAAGGAAAAAGGCAAATGGCTCTGATGAAGACCGTATATCTCCTCACAGTCAAATTGATGAGAAGGATGGGGCTCATGTCGAGGAAGATGATAATGATGACGTGCAATGGCAAACAGATACATCAGTGGAGGCTGCTCGTCAACGAATCCAGGAACAGTTGAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAGATGAACCTGAGAAGAAGGAGAACGCAGCAACTAAGGTGAGTGACAACCCTGAGAATGGTAACTCCATGACCTACAGGACACTGGTTACAGAAGTCAAAGAAAATTTGAATAAAGGTGTGAAGGCGAAAGAGTTGTTGTCCCATCTGGCCGCACTTCCTGCTTCGCCTCAGGAAAAGATGAGTGCTCTGTTTGAAGCCCTATTTGAGAGCATCGAGAAAGGGTTTGGAAAAGAAGCGATTAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCCGAGGAAGAGGATTTGCAGTTGTTACTGCTGCGTGCAATTGAGGAATTTTCTTGTAAGTCCACTTCCAATGCACTGAAGGAGGTTGCCTTGGTTCTGAAGGCACTCTATGATGCTGATGTGTTGGTGGAAGAGCACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGTGATAACAGGAATTCTCAGATTTGGAAAAATGCTCAACCTTTCATTGAATGGCTTCAGAATGCAGAATCAGAAACCGAGGAAGAATGA 1332 0.4294 MALQNIGAGNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETTKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERMKEGELADEEQKKVKKEVIKKKGTSSSKDGTTKSTTSRKKANGSDEDRISPHSQIDEKDGAHVEEDDNDDVQWQTDTSVEAARQRIQEQLSAVTADMVMLSTDEPEKKENAATKVSDNPENGNSMTYRTLVTEVKENLNKGVKAKELLSHLAALPASPQEKMSALFEALFESIEKGFGKEAIKKKSYLAAAVAEEEDLQLLLLRAIEEFSCKSTSNALKEVALVLKALYDADVLVEEHIVQWYQKGLKGDNRNSQIWKNAQPFIEWLQNAESETEEE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0101 443 MobiDBLite consensus disorder prediction 147 236 - -
Aed3g0101 443 CDD W2_eIF5 326 441 - -
Aed3g0101 443 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Aed3g0101 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 443 - -
Aed3g0101 443 SMART 542_3 351 439 IPR003307 GO:0005515
Aed3g0101 443 Coils Coil 159 179 - -
Aed3g0101 443 SUPERFAMILY ARM repeat 293 437 IPR016024 -
Aed3g0101 443 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Aed3g0101 443 ProSiteProfiles W2 domain profile. 283 443 IPR003307 GO:0005515
Aed3g0101 443 Gene3D - 105 145 - -
Aed3g0101 443 MobiDBLite consensus disorder prediction 148 234 - -
Aed3g0101 443 MobiDBLite consensus disorder prediction 270 290 - -
Aed3g0101 443 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Aed3g0101 443 Pfam eIF4-gamma/eIF5/eIF2-epsilon 365 443 IPR003307 GO:0005515
Aed3g0101 443 Gene3D - 285 443 - -
Aed3g0101 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 443 IPR045196 GO:0003743|GO:0006413
Aed3g0101 443 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Aed3g0101 443 Gene3D - 3 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0101 Aed-Chr3 761616 762947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0101 1 436 Eukaryotic Initiation Factors Gene Family AT1G36730 62.780 4.44e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0101 K03262 - gmx:100777906 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0101 3 761616 762947 Aed3g0101 3 761616 762947 ECH