Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0099 ATGGCTTTACAGAACATTGGTGCTGCCAACAGTGATGATGCCTTCTACAGGTATAAGATGCCTAGGATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACTAATGTTGTCAATATGGTTGATATTGCCAAGGCATTGGCAAGGCCTGCGGCTTACACGACCAAGTATTTTGGTTGTGAACTTGGAGCCCAGTCGAAATTTGATGAGAAGACCGGCACTTCTCACGTCAATGGAGCACATGATACTGCTAAGCTTGCTGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAAATCATAATCACTAAGAACCAAATGATCCAGCTGAAATGTGCAGCTTGCGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTGACTACCTTCATCATTAAGAACCCCCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAGTTGGCCGATGAGGAGCTGAAGAAAGTGAAGAAAGAAGTTATTAAGAAGAAAGGAACTTCATCTTCTAAGGATGGCACTGCTAAACCCACCTCTTCAAAGAAGAAGGCAAGTGGCTCTGATGAAGACCGCATTTCACCAACTCACAGTCAGATTGATGAGAAAGAGGAGATTCCAGATGAAGGTGATGACGATGACGATGTGCAATGGCTGACAGATACATCACTTGATGCTGCTCGACAACGTATCCAAGAACAGTTAAGTGCTGTGACAGCTGATATGGTTATGCTTTCTACAGATGAACCAGAGACGAAGAAAAAAGCAGCAAGTAACGGAAATGGTGGTTCTCAGAATGGTAACTCAATGCACTATGGGACCCTAGTTGGTGAAGTGAAAGCAAATCTGAAGAAAGGTGTTGGAGCGAATGAATTGTTGTCCCATCTCTCAGCACTTCCTACACCTGCTCAAGAAAAGATGAGTGCTCTGGTTGAAGCTCTATTTGAGGGAACTGAGAAAGGTTTTGCTAAAGAAGCTGATAAGAAGAAGAACTACTTTGCTGCTGCTGTTGCTGAAGACGGATCTCAGCTGTTATTGCTTCATGCTATCGAAGAATTTTCTTGCAAGGCTACTTCCAATGCTTTGAAGGAGGTTGCCCTGGTTCTAAAGGCACTCTACGATGCTGATGTTTTTGAGGAAGAGCACATAGTGAAGTGGTATCAAAAGGGACTGAAGGGCGATAACAAGAACTCGAAGATTTGGAAGAATGTTCAACCTTTCATTGATTGGCTTCAGAGTGCAGAATCAGAAACCGAGGAAGAATAA 1332 0.4317 MALQNIGAANSDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPAAYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETEIIITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGELADEELKKVKKEVIKKKGTSSSKDGTAKPTSSKKKASGSDEDRISPTHSQIDEKEEIPDEGDDDDDVQWLTDTSLDAARQRIQEQLSAVTADMVMLSTDEPETKKKAASNGNGGSQNGNSMHYGTLVGEVKANLKKGVGANELLSHLSALPTPAQEKMSALVEALFEGTEKGFAKEADKKKNYFAAAVAEDGSQLLLLHAIEEFSCKATSNALKEVALVLKALYDADVFEEEHIVKWYQKGLKGDNKNSKIWKNVQPFIDWLQSAESETEEE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0099 443 Gene3D - 105 145 - -
Aed3g0099 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 443 IPR045196 GO:0003743|GO:0006413
Aed3g0099 443 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Aed3g0099 443 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Aed3g0099 443 SUPERFAMILY ARM repeat 294 437 IPR016024 -
Aed3g0099 443 Pfam eIF4-gamma/eIF5/eIF2-epsilon 365 443 IPR003307 GO:0005515
Aed3g0099 443 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Aed3g0099 443 Gene3D - 2 104 - -
Aed3g0099 443 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Aed3g0099 443 SMART 542_3 352 439 IPR003307 GO:0005515
Aed3g0099 443 MobiDBLite consensus disorder prediction 185 239 - -
Aed3g0099 443 CDD W2_eIF5 327 441 - -
Aed3g0099 443 Gene3D - 290 434 - -
Aed3g0099 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 443 - -
Aed3g0099 443 ProSiteProfiles W2 domain profile. 284 443 IPR003307 GO:0005515
Aed3g0099 443 MobiDBLite consensus disorder prediction 185 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0099 Aed-Chr3 757648 758979 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0099 1 436 Eukaryotic Initiation Factors Gene Family AT1G77840 64.560 2.22e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0099 K03262 - gmx:100777906 768.844