Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0070 ATGGCTGAAATTGAATACCATGCAAAATCATCGAGTAGTAGAGCTCCGGCCCTAAAGCTCTTTGGCATCAACATTAACAAGTCCCCAGAAGAAGATGAAACAGGTTCGAATTCTGAGATGACTTTGATCTGTTCATCAAGAAAATACGAGTGTCAGTACTGCTGCAGAGAATTCGCAAACTCACAGGCACTAGGAGGGCACCAAAACGCGCACAAGAAAGAGAGACAGCTCTTCAAACGTGCTCAAATGCAAGCTGCTCGTGGTTTTCTCTCTTCACAATTTCACAACACAATCATTTCACCGCAATTATCTCATCCACCTTTGTCGTGGATATGCACACCGCATGCTGCTGCTGCTAGTGCCTCCATCACCGATGGCCGTAGCCACCGCCACCCTCTGCCACGGTTCGGTGACTTCAACGGCGGTGATGGTAGTGAAAGAGGGTTCGGTACTATGAATTTGCATCTTAGCCTATGA 477 0.4738 MAEIEYHAKSSSSRAPALKLFGININKSPEEDETGSNSEMTLICSSRKYECQYCCREFANSQALGGHQNAHKKERQLFKRAQMQAARGFLSSQFHNTIISPQLSHPPLSWICTPHAAAASASITDGRSHRHPLPRFGDFNGGDGSERGFGTMNLHLSL 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0070 158 Gene3D Classic Zinc Finger 36 98 - -
Aed3g0070 158 PANTHER ZINC FINGER PROTEIN 5 1 120 IPR044299 GO:0010090
Aed3g0070 158 SUPERFAMILY beta-beta-alpha zinc fingers 46 76 IPR036236 -
Aed3g0070 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Aed3g0070 158 PANTHER ZINC FINGER PROTEIN 6-LIKE 1 120 - -
Aed3g0070 158 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0070 Aed-Chr3 592412 592888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0070 17 89 C2H2 Transcription Factor Family AT1G67030 66.667 1.31e-26 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0070 - - gmx:100527555 223.016