Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0056 ATGGTGGTCCTGACACTCACACCCCTTTTGGCCATAGTCGGTATTCTCCTACTACTTAAAGTGGTTGTTTATGACAACCTATGGTGTTACTGGCTCACCCCACTACGTATAAAAAGGATCATGGATATTCAAGGTGTCCGTGGCCCTAAACCTCGTTTCTTCACTGGCAACATCCTAGTCATGGCTTCCCTTGTCTCCAAAACAACCTCCCAAGACATGAAAACCATAAGCCATGACATTGTTGGCCGTCTTCTCCCACATTTCTTACTTTGGTCTACCCAATTTGGAAAGAGGTTTCTATATTGGAATGGTTCAGAACCAAGGTTGTGTCTGACCGAGACTGAATTGATAAAAGAGTTTCTTTCAAAACACAGTACGGTATCTGGGAAATCCTGGCAGCAAAGACAAGGTTCAAAGAATTTCATTGGGGAGGGACTGTTGATGGCAAATGGTGAAGATTGGTATCATCAACGTCACATGGTTGCCCCTGCATTCATGGGAGACAGACTTAAGAGCTATGGTGGGCATATGGTGGAATGCACAAAGGAGATGCTCCAATCACTGAGTGGGAAAAGTGAGGTGGAGATTGGTGAGTACATGACCAAACTAACTGCGGATATTATCTCAAGGACTGAGTTTGGCACCAGCTATCAGAAGGGGAAGAAAATATTCCACCTCCTCACACTTCTCCAGAGTCGTTGTGCTCAAGCAAGTCGTCATCTTTGCATTCCTGGAAGCAGGTTTTTTCCAACCAAGTATAACAGAGAGATAAAGTCATTGAAGATGGAGGTGGAGAATCTGCTCATGGAGATCATACAGAGCAGGAAAGACTGTGTTGAGATTGGTAGGAGCAACTGTTATGGGAATGATTTGTTGGGGATGCTACTCAATGAGATGCAGAAAAAAGGGAATGGGATGAATCTGCAGCTTGTCATGGATCAATGCAAAACATTTTTCTTTGCAGGACATGAAACCACTGCACTTTTACTAACTTGGACACTCATGTTACTGGCCAGCAATACTTCTTGGCAAGACAAAGTCAGAGCTGAGGTTCAAACTGTCTGCAATGGGGGAATTCCCTCTCCTGATCAACTCTCCAAGCTCACTCTTTTGCATATGGTGATAAACGAATCAATGAGGTTGTATCCCCCAGCATCGGTGCTCCCTAGAATGGTGTTTGAAGACATAATGCTAGGTGACCTCTATATTCCAAAGGGCTTATCAATTTGGATTCCAGTGCTGGCTATTCATCATAGTGAAAAACTATGGGGTAAAGATGCAAATGAGTTTAACCCTGAGAGGTTTACTTCAAAGTCATTTGTTCCAGGCCGTTTTTTACCATTTGCTTCTGGCCCTAGAAATTGTATTGGACAAGCATTTGCCTTAATGGAAGCTAAGATCATACTAGCCATGTTGATTTCTCGCTTTAGCTTCACCATTTCTGATAATTACCGTCATGCCCCTGTGGTTGTCCTCACTATTAAGCCCAAATATGGGGTTCAAGTTTGTTTGAAGCCCTTGGAGCCATCAAGCTAG 1536 0.4355 MVVLTLTPLLAIVGILLLLKVVVYDNLWCYWLTPLRIKRIMDIQGVRGPKPRFFTGNILVMASLVSKTTSQDMKTISHDIVGRLLPHFLLWSTQFGKRFLYWNGSEPRLCLTETELIKEFLSKHSTVSGKSWQQRQGSKNFIGEGLLMANGEDWYHQRHMVAPAFMGDRLKSYGGHMVECTKEMLQSLSGKSEVEIGEYMTKLTADIISRTEFGTSYQKGKKIFHLLTLLQSRCAQASRHLCIPGSRFFPTKYNREIKSLKMEVENLLMEIIQSRKDCVEIGRSNCYGNDLLGMLLNEMQKKGNGMNLQLVMDQCKTFFFAGHETTALLLTWTLMLLASNTSWQDKVRAEVQTVCNGGIPSPDQLSKLTLLHMVINESMRLYPPASVLPRMVFEDIMLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFTSKSFVPGRFLPFASGPRNCIGQAFALMEAKIILAMLISRFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLEPSS 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0056 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 503 - -
Aed3g0056 511 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 Pfam Cytochrome P450 93 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 Coils Coil 257 277 - -
Aed3g0056 511 Gene3D Cytochrome P450 43 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 503 - -
Aed3g0056 511 SUPERFAMILY Cytochrome P450 48 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed3g0056 511 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0056 Aed-Chr3 493692 496497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0056 2 369 Cytochrome P450 AT5G38450 64.550 1.43e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0056 K10717 - gmx:100808392 925.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g0056 3 493692 496497 Aed3g0056 3 493692 496497 ECH