Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0055 ATGGCACCTTTCACTATCTCTACACCTTCCTATACCGGAAAGAAGAAGATTCTCTTTATAATGGGTGCAACAGGCACAGGCAAAACAAAACTTTCCATAAACTTGGCCACTCAGTTTCCTTCTGAAATCATAAACTCTGACAAAATTCAAGTTTACAAAGGCCTTGACATAATCACCAACAAGGTACCAGAGTCTGAACGACATGGCATTCCCCATCATCTGCTAGGAACCATCAACGACCCTGATTATGACTTCACTGTTGATAACTTTTGCAAGGAAGTCCTCGCTGCCCTTGATCTCATCTTTCAAAATGGACACCTACCCATTATCGTAGGAGGCTCAAACAATTACCTTGCAACATTGCTTGAAGACACCAACATCGGATTTCGTTCCAAATATGATTGCTGCTTCATCTGGGTTGATGTGTCTTTACCTGTTTTGTTTCCATATTTGGATAAAAGGGTGGATGAGATGCTTGATGTGGGAGTTGTTGACGAGATTCGAGAGGCTTTTGTGCCTGGAGCTGATTACTCTCGTGGGATTAGAAGAGCCATTGGTGTTCCTGAGTTGGGAGAGTATTTTCTGGTTGAGAAGGAAATAGATGATGAGGCTATAAAGGAAAAGATGTTGAAACATGCTATTGCCAGAACCAAAGAGAACACTTGTAAGTTAGCTGAGATGCAACTCTTGAAGATCCATAGGATGAACTATGAGTTTGGATGGACAATGACCAGAATTGATTCAACACAAGTGTTTGAGGCAATTTTAAAAGGACTTGATCATAAGCACTTGTATCAAGAGATTGTGTTCAACCCAAGCTTGGAGATAATGAAAACATTTCTACAAGAGACAACTCCAGCATGGGGAAAGGAACCACCCCAAAATGGTGAACAAGTCACCATTTGTGCTTAA 912 0.4112 MAPFTISTPSYTGKKKILFIMGATGTGKTKLSINLATQFPSEIINSDKIQVYKGLDIITNKVPESERHGIPHHLLGTINDPDYDFTVDNFCKEVLAALDLIFQNGHLPIIVGGSNNYLATLLEDTNIGFRSKYDCCFIWVDVSLPVLFPYLDKRVDEMLDVGVVDEIREAFVPGADYSRGIRRAIGVPELGEYFLVEKEIDDEAIKEKMLKHAIARTKENTCKLAEMQLLKIHRMNYEFGWTMTRIDSTQVFEAILKGLDHKHLYQEIVFNPSLEIMKTFLQETTPAWGKEPPQNGEQVTICA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0055 303 Gene3D - 14 281 IPR027417 -
Aed3g0055 303 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 7 293 - -
Aed3g0055 303 Pfam IPP transferase 50 125 - -
Aed3g0055 303 Pfam IPP transferase 131 229 - -
Aed3g0055 303 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 7 293 IPR039657 -
Aed3g0055 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 171 IPR027417 -
Aed3g0055 303 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 144 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0055 Aed-Chr3 473257 474168 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0055 131 292 C2H2 Transcription Factor Family AT2G27760 32.979 6.96e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0055 K10760 - gmx:121173984 527.709