Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0054 ATGCATCTGCTTGAACAGACTATGATGGCCCCTTTCACTGTTGGCAAGAAGAAGGCTCTCTTCATAATGGGTGCAACTGGCACAGGCAAAACCAAGCTATCCATAAACTTGGCCACTGAATTCCCTTCTGAAATCATAAACTCTGACAAAATTCAAGTTTACAAGGGTCTTGACATAATCACCAACAAGGTACCAGAGTCTGAACGCCATGGCATTCCCCATCACCTCCTAGGGATCATCGATGACCCTGATTATGACTTCACTGTTGATGACTTTTGCAACCGCGTCCTTTCTGCTCTTGATACCATCATAGAAAATGGACACCTACCAATCATCGTTGGGGGCTCAAACACTTACCTCACAGCATTGCTTGAGGATCCTAACATCGCATTTCGTTCCAAATATGACTGTTGTTTCATCTGGGTTGATGTCTCTTTACCTGTGCTGTTTCAGTATTTAGATAAAAGGGTTGATGAAATGGTTGATGTGGGAGTTGTGGATGAGATTCGAGAGGCTTTTGTGCCTGAAGCTGATTACTCTCGTGGGATTAGAAGAGCCATTGGGGTTCCTGAACTGGGAGGGTATTTCCTGGTTGAGAATGAAATAGACGATGAGGCTGTAAAGGAAAAGATGTTGAAACATGCTATCGCGAGAACCAAAGAGAACACTTTCAAGTTGTCTCAGAGGCAACTCTTGAAGATCCATAGGATGAGCTATGACCTTGGATGGAGAATGACTAGAATTGATTCAACACGAGTGTTTGAGGCAGTTTTAAAAGGACTGGATTATAAGCACTTGTATCAGGAGATTGTGTTCAACCCAAGCTTGGAGATAATGAAAACATTTCTACAAGAGACAACTCCAGCATGGGGAAAGGAACCACCCCAAAATGGTGAAAAAGTCACCATTTGTGCTTCAAACATAGTTCAATTTGGTTAA 939 0.4271 MHLLEQTMMAPFTVGKKKALFIMGATGTGKTKLSINLATEFPSEIINSDKIQVYKGLDIITNKVPESERHGIPHHLLGIIDDPDYDFTVDDFCNRVLSALDTIIENGHLPIIVGGSNTYLTALLEDPNIAFRSKYDCCFIWVDVSLPVLFQYLDKRVDEMVDVGVVDEIREAFVPEADYSRGIRRAIGVPELGGYFLVENEIDDEAVKEKMLKHAIARTKENTFKLSQRQLLKIHRMSYDLGWRMTRIDSTRVFEAVLKGLDYKHLYQEIVFNPSLEIMKTFLQETTPAWGKEPPQNGEKVTICASNIVQFG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0054 312 Gene3D - 16 283 IPR027417 -
Aed3g0054 312 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 146 245 - -
Aed3g0054 312 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 213 IPR027417 -
Aed3g0054 312 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 12 296 IPR039657 -
Aed3g0054 312 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 12 296 - -
Aed3g0054 312 Pfam IPP transferase 133 231 - -
Aed3g0054 312 Pfam IPP transferase 52 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0054 Aed-Chr3 469323 470261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0054 133 294 C2H2 Transcription Factor Family AT2G27760 32.447 2.06e-19 86.7