Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0023 ATGCCGGAGCTTCGTAGTGGACCGCGACGACGTCGTGCTCCGGTTGGTTTCAAAAGCTCTGAACCACCGTCTCCGGTGGGGAGATACGTTAAGACACGCGCTGCAGTCGCCAGGGAGGCAGCGGCGGCGGCGGAGAGGCCAATTACTCGTTTGGCGTCCCAAGAATTAGAAGAAGAGCAGAAGCCCCTTATAGTAATTTCCGATCACACAAAGAAAGGTGCTGAGATGGCCGACGAGAGCGGTGGCTTGAGTGCGAACAAGGGCGTTGCACAAGAAGATGACACAAACGCAGCTCCTTTTCCAGAGAGGGTTCAAGTAGGAGGCTCACCTGTTTACAAAGTAGACAGGAAGCTGGGCAAAGGTGGCTTTGGGCAGGTTTTTGTTGGCCGTCGAGTCACTGGTGGTAACGACCGGACCTCTGGTGCTGGTGCCACTGAGGTGGCTTTGAAATTTGAGCATAGGAACAGCAAAGGCTGTAACTATGGCCCTCCTTATGAGTGGCAAGTGTACAACACCCTTGGTGGCAGTCATGGAATACCTAAAGTACACTACAAAGGGAGACAAGGGGAATATTATGTGATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATTCCTCAAGCCAGGCGATGACTGCGGAAATGGTTGCATGTATTGCAGTTGAGTCCCTGTCGATCCTGGAGAAGATGCATGCAAGAGGCTATGTTCATGGAGATGTAAAACCGGAGAACTTCTTACTAGGTCAACCTTCTACACCACAAGAAAAGAAATTGTTTCTTGTAGACCTTGGATTAGCAACAAAGTGGAGAGACACCTCCAGTGGGCAGCATGTTGAATACGATCAACGTCCTGATATGTTTAGAGGGACTGTTCGTTATGCTAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATATACACTCATCTTCCTTCATAAAGGCAGGTTACCTTGGCAAGGTTATCAGGGTGATAACAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGTTTCTGCCCTGCTCCTTTTAGGCAGTTCCTTGAGTTTGTAGTAAACATGAAATTTGATGAAGAACCTAACTATTCCAGGCTAATATCTTTGTTTGATGGTATGCTTGGACCGAATCCTGCATTGAGGCCAATTAACACTGAAGGTGCTCAAAAGGTTGGGCAGAAGAGGGGTAGATTGAATATTGAGGAAGAGGATGATTCACAACCCAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATTTCAGTTTACAATGCAAGACTGCCAATGAAGCAAAGGTATCATTACAATGTAGCGGATCCAAGATTAGCGCAGCATGTGGAGAGAGGGATTGCAGATGGCCTTCTTATTAGTTGTGTGGCTTCTTGTTCCAATCTCTGGGCCCTTATTATGGATGCTGGAACTGGCTTTTCAAGTCAAGTTTATAAGTTGTCACCATTTTTCTTACACAAGGAATGGATCATGGAACAGTGGGAAAAGAACTATTACATTACTTCTATTGCAGGGGCTAATAATGGGAGCTCTCTTGTGGTGATGTCAAAAGGCACACAGTTTACACAACAATCATACAAAGTAAGTGATTCATTCCCGTTCAAATGGATAAACAAGAAGTGGAGAGAAGGCTTTCATGTGACCTCAATGGCCACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGAAATGCTGGATTCAGTGATCAGGTTGTTGAACTTGATTTTCTCTATCCTAGTGAGGGAATCCACAGACGATGGGATAATGGTTATAGGATTACAGCAACTGCTGCTACATGGGATCAATCTGCTCTTATACTGAGCATTCCTAGGCGCAGGCCTGGAGATGAAACCCAGGAAACTCTGCGGACATCTCAATTTCCAAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCTTGTTTGTGCTATGGGCGCACAGTATGCTGA 2025 0.4598 MPELRSGPRRRRAPVGFKSSEPPSPVGRYVKTRAAVAREAAAAAERPITRLASQELEEEQKPLIVISDHTKKGAEMADESGGLSANKGVAQEDDTNAAPFPERVQVGGSPVYKVDRKLGKGGFGQVFVGRRVTGGNDRTSGAGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQAMTAEMVACIAVESLSILEKMHARGYVHGDVKPENFLLGQPSTPQEKKLFLVDLGLATKWRDTSSGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPAPFRQFLEFVVNMKFDEEPNYSRLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARLPMKQRYHYNVADPRLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFSSQVYKLSPFFLHKEWIMEQWEKNYYITSIAGANNGSSLVVMSKGTQFTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSDQVVELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0023 674 PANTHER CASEIN KINASE-RELATED 69 645 - -
Aed3g0023 674 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 69 645 - -
Aed3g0023 674 MobiDBLite consensus disorder prediction 1 16 - -
Aed3g0023 674 CDD STKc_CK1 112 387 - -
Aed3g0023 674 MobiDBLite consensus disorder prediction 1 28 - -
Aed3g0023 674 ProSiteProfiles Protein kinase domain profile. 112 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0023 674 SUPERFAMILY Protein kinase-like (PK-like) 112 395 IPR011009 -
Aed3g0023 674 Gene3D Transferase(Phosphotransferase) domain 1 83 431 - -
Aed3g0023 674 SMART serkin_6 112 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0023 674 Pfam Protein kinase domain 112 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0023 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Aed3g0023 674 ProSitePatterns Protein kinases ATP-binding region signature. 118 150 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0023 Aed-Chr3 205055 211311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0023 99 269 EF-hand Containing Proteins AT4G36070 27.322 1.27e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Aed3g0023 Pkinase 1.2e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0023 - - gmx:100819969 1301.58