Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0017 ATGAGAGCTATAACCCACCACCTTTCACTGCTGAATTGGAGACCACGATCTGTTTTGTCTTTAAGAAATACTAGTTATACCATGTCACAATCTGATAATTCCCCTGCTTTCAACACACCCAGATTGATTCTCAAGAAGGTTTTGGCCAAATCTCAACATGAAGGGGATGGAGCTGTTGTTAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCAGCAGGATTTCCTGATCATCCCCACCGAGGTTTTGAAACCGTCACCTACATGCTAGAGGGAGGCATAACTCACCAAGATTTTGCTGGGCACAAGGGTACAATAAGAAGTGGTGATGTTCAGTGGATGACCGCAGGAAGGGGAATTATTCATTCTGAAATGCCCGCAGAAGCAAACAACAACAAGGGATTGCAACTATGGATCAATTTATCATCCAAAGACAAAATGATGGAGCCTAAGTACCAAGAACTTCCGAGTGAGAACATACCAAGAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTGCATTCGCCTGTCTACACACGAACTCCGACCATGTACCTTGTTTTCTCCATGATGCCCGGAACTCAGTGGCATCAGAGCACTCCGGAGTCGTGGAATTCCTTTGTTTATATAATCGAAGGGGAAGGAGTTTTCGGGTCTCCAACTTCACCCCCAACTGTGGCGCATCATCTCCTTGTTTTCACTCTAGGCGATGGCCTTAGCGTATGGAATAACTCTTCAAACCCTTTGAGCTTTGTTCTTGTCGCAGGCCAACCTCTTAACGAGCCACTGGTTCAGTATGGCCCTTTTGTCATGAACACTCAGTCTGAAATTGATAAAACTATTCAAGACTATCACTATGCCAGGAATGGCTTTGAGATGAGGAACTATTGGACCTCATCAAAATAA 969 0.4499 MRAITHHLSLLNWRPRSVLSLRNTSYTMSQSDNSPAFNTPRLILKKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRSGDVQWMTAGRGIIHSEMPAEANNNKGLQLWINLSSKDKMMEPKYQELPSENIPRAEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFSMMPGTQWHQSTPESWNSFVYIIEGEGVFGSPTSPPTVAHHLLVFTLGDGLSVWNNSSNPLSFVLVAGQPLNEPLVQYGPFVMNTQSEIDKTIQDYHYARNGFEMRNYWTSSK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0017 322 Gene3D Jelly Rolls 54 306 IPR014710 -
Aed3g0017 322 CDD cupin_pirin_C 203 279 - -
Aed3g0017 322 SUPERFAMILY RmlC-like cupins 41 318 IPR011051 -
Aed3g0017 322 PIRSF Pirin 39 319 IPR012093 -
Aed3g0017 322 Gene3D Jelly Rolls 175 280 IPR014710 -
Aed3g0017 322 CDD cupin_pirin_N 58 155 - -
Aed3g0017 322 Pfam Pirin C-terminal cupin domain 206 311 IPR008778 -
Aed3g0017 322 Pfam Pirin 61 153 IPR003829 -
Aed3g0017 322 PANTHER PIRIN-RELATED 32 321 IPR012093 -
Aed3g0017 322 PANTHER PIRIN-LIKE PROTEIN 32 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0017 Aed-Chr3 161466 163185 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0017 28 314 Calmodulin-binding Proteins AT3G59220 64.014 9.74e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0017 K06911 - gmx:100802145 581.252