Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0014 ATGGGTTGCTTTTCGTGTTTCGAATCGAGTTCGAGGGAGGATGACAAGCTCCGTCTCCGTCCTCAGCAGCAACAGCAACATCAACATCAACCCAATCCAGCTCTCCCTTCTCAGATTTCGAGATTGCCCTCTGGAGCCGACAAGTTACGGTCCAGAAGTAACGGAGGTTCCAAAAGGGAACTTCCACTTCCTCCTCCTCCCAAGGAACATGTCCAAATTGCTGCTCAAACTTTTACTTTCCGTGAACTTGCCGCTGCAACTAAAAACTTTAGGCCGGAGTCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGCTCAGCTTGTTGCTGTCAAACAGTTAGACAAAAATGGTCTCCAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTCAATCTCATTGGATACTGTGCCGATGGGGATCAACGCCTCCTTGTTTATGATTTTATGCCTTTGGGATCATTGGAAGATCACCTTCATGATTGGAACACTAGAATGAAAATAGCTGTTGGTGCTGCGAAAGGATTAGAATACCTGCATGATAAGGCAAATCCTCCTGTCATCTATAGAGACTTCAAGTCATCTAACATATTACTTGATGAAGGATACCAGCCAAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACACGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAGCTAACTGTGAAGTCTGATGTATATAGTTTTGGGGTGGTCTTCTTAGAGCTGATTACTGGCCGTAAAGCAATTGACAGCACCCAGCCCCAGGGAGAACAAAATCTTGCACGTCCACTTTTTAATGACCGCAGGAAGTTTTCAAAGTTGGCTGATCCCAGACTGCAGGGACGGTTTCCCATGCGGGGTCTTTACCAGGCTCTAGCTGTGGCATCAATGTGCATTCAAGAATCAGCTGCGACGCGTCCTCTTATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGCATATGACCCCAACAATGCTAGGGGGTCTAGTGATCAGGATAAAAGGAACAACAGATCAGATGATAAAGCAGGTGGTGGAAGAATATTATTGAAAAATGATGAAGCTGGGGGATCCGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCAAGGATGTTAAACAGAGATCTAGATAGAGAGCGAGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAATTTCAGACAAAAAAGAAAACAAAGTTTGCAGCAGGGCAGTCTTGATGGTTCTAACGCTTAG 1374 0.4665 MGCFSCFESSSREDDKLRLRPQQQQQHQHQPNPALPSQISRLPSGADKLRSRSNGGSKRELPLPPPPKEHVQIAAQTFTFRELAAATKNFRPESFVGEGGFGRVYKGRLETTAQLVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYDFMPLGSLEDHLHDWNTRMKIAVGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYQPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPQGEQNLARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQAYDPNNARGSSDQDKRNNRSDDKAGGGRILLKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENFRQKRKQSLQQGSLDGSNA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0014 457 CDD STKc_IRAK 96 352 - -
Aed3g0014 457 ProSitePatterns Protein kinases ATP-binding region signature. 96 119 IPR017441 GO:0005524
Aed3g0014 457 MobiDBLite consensus disorder prediction 23 39 - -
Aed3g0014 457 MobiDBLite consensus disorder prediction 367 422 - -
Aed3g0014 457 MobiDBLite consensus disorder prediction 436 457 - -
Aed3g0014 457 ProSiteProfiles Protein kinase domain profile. 90 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0014 457 SUPERFAMILY Protein kinase-like (PK-like) 76 358 IPR011009 -
Aed3g0014 457 PANTHER OS07G0668900 PROTEIN 1 449 - -
Aed3g0014 457 Gene3D Transferase(Phosphotransferase) domain 1 167 381 - -
Aed3g0014 457 MobiDBLite consensus disorder prediction 1 68 - -
Aed3g0014 457 Pfam Protein kinase domain 93 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0014 457 MobiDBLite consensus disorder prediction 360 422 - -
Aed3g0014 457 MobiDBLite consensus disorder prediction 441 457 - -
Aed3g0014 457 Gene3D Phosphorylase Kinase; domain 1 74 166 - -
Aed3g0014 457 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 449 - -
Aed3g0014 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0014 Aed-Chr3 127773 131123 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0014 1 436 Glycoside Hydrolase AT3G07070 53.084 1.18e-155 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Aed3g0014 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0014 K13430 - gmx:100305422 781.171