Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0008 ATGATGAGAAGAAAAAAAGAAGAAATAAGTAAGGAAGAGCACGAGGTGGTATCCTGTTTGCTCCTACTTTCCAATGCAAAAGAGAGAGAGGAATATGTTCATTTTGAGTGCTCCATTTGCAACAAGGTGTTCGGGTCACACCAGGCCTTAGGTTGGCACTGTGTTAGTCAGAAGAACGTCAAGGAATGTTTTGCCAGCAGTAGTTAA 207 0.4203 MMRRKKEEISKEEHEVVSCLLLLSNAKEREEYVHFECSICNKVFGSHQALGWHCVSQKNVKECFASSS 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0008 68 Pfam C2H2-type zinc finger 34 53 - -
Aed3g0008 68 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 6 67 - -
Aed3g0008 68 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 6 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0008 Aed-Chr3 73318 73524 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0008 9 65 C2H2 Transcription Factor Family AT4G35280 60.345 2.43e-16 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed3g0008 zf-C2H2_6 5.1e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0008 - - gmx:100792631 91.2781