Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed3g0007 ATGGCGGCTGCGAACCAAGGAAAGTGTCCACCTATGTTTCCTTGTGGATATGTTGACAATATCAGTTTCCCCTTTACTAAATCAGAAAGCCAGGACTGTGGCTTATTGCCCATTAGCAATTGTGATGATAATGCTTGCCACTATCGCCATGGAGGCCAGTGTCAACTTGACCGCACATACAAATTTTGTTGTGCCAATGGTACCAATACCACGATTGTGAATACGAAGAAAAAAAGGTTCAATTGGGAGGTCAAACTGGGTATAGGTTTAGGTATTGGAATCCCATGCATGTTGGTAATTGGGTTGCTATGTTTTCTCTTTCTACTCTACAAACGAAAACATGGTACCTCAGGTGGACAGTTGGAGTCAAGAGATTCATATTGTGATTCCTCCTCAAATCCTCATCAAGCAAGCAGTAGCGAGTACTTTGGAGTTCCACTCTTCTCTTATGAGCAGCTTAAACAAGCAACAAACAATTTTGACGATACTAAAGAACTTGGAGATGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGACGTGAAGTTGCTGTGAAGCGCTTATACGAGCATAACTGGAAGCGAGTCGAACAGTTCATGAACGAAGTTAGGATCCTCACACGTTTGCGTCACAAAAATCTCGTGTCACTCTACGGCTGCACTTCACGGCACAGCCGTGAACTCCTGCTTGTGTATGAATACATTTCAAACGGCACCGTAGCGTGTCATCTTCACGGCGGATTAGCGAAGCCTGGCTCGCTACCGTGGTCTACAAGAATGAGAATTGCCATAGAGACTGCTAATGCATTGGCATATCTCCACGCCTCTGACATCATTCACCGTGACGTGAAAACAAACAACATTCTCCTCGAAAACAACTTTTGTGTTAAGGTAGCAGATTTTGGTCTTTCAAGAGATCTTCCAAACGATGTCACACATGTTTCCACAGCTCCACAAGGGTCCCCGGGTTACCTTGACCCTGAGTATTACAATTGCTATCAGCTCACAAGTAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTAATATCATCAAAGCCTGCAGTTGATATGAACAGGAGCAGGGATGAGATTAACTTGTCTAATCTGGCCATAAACAAGATTCAGCAAAGTGCATTTAGTGAACTGGTAGATCCTTTTCTTGGTTTTGATTCAGATTGTGGGGTTAAGAGGATGATAGTTTCAGTGGCAGGGTTGGCTTTTCAGTGTTTGCAAAGGGAAAAGGATTTGAGACCTTCCATGGATGAAGTGTTGGATGAACTGAAGAGAATTGAGAGTGAGGTTCAAATCGAGGGTAGTAATTGTGCACATTCACCACCACCACCAGTTGGATTGTTGAAGAATATGAAGCCTACTTCCCCAAACACTGTTACTGATAAATGGGAAAGTAAATGTACTACGCCTAATGTCAGTGGTTAA 1452 0.4339 MAAANQGKCPPMFPCGYVDNISFPFTKSESQDCGLLPISNCDDNACHYRHGGQCQLDRTYKFCCANGTNTTIVNTKKKRFNWEVKLGIGLGIGIPCMLVIGLLCFLFLLYKRKHGTSGGQLESRDSYCDSSSNPHQASSSEYFGVPLFSYEQLKQATNNFDDTKELGDGGFGTVYYGKLPDGREVAVKRLYEHNWKRVEQFMNEVRILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGSLPWSTRMRIAIETANALAYLHASDIIHRDVKTNNILLENNFCVKVADFGLSRDLPNDVTHVSTAPQGSPGYLDPEYYNCYQLTSKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAINKIQQSAFSELVDPFLGFDSDCGVKRMIVSVAGLAFQCLQREKDLRPSMDEVLDELKRIESEVQIEGSNCAHSPPPPVGLLKNMKPTSPNTVTDKWESKCTTPNVSG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed3g0007 483 CDD STKc_IRAK 166 435 - -
Aed3g0007 483 Gene3D Transferase(Phosphotransferase) domain 1 237 446 - -
Aed3g0007 483 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 45 482 - -
Aed3g0007 483 Gene3D Phosphorylase Kinase; domain 1 131 236 - -
Aed3g0007 483 Pfam Protein tyrosine and serine/threonine kinase 163 366 IPR001245 GO:0004672|GO:0006468
Aed3g0007 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Aed3g0007 483 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 45 482 IPR044652 -
Aed3g0007 483 MobiDBLite consensus disorder prediction 460 483 - -
Aed3g0007 483 SMART serkin_6 160 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0007 483 ProSiteProfiles Protein kinase domain profile. 160 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed3g0007 483 SUPERFAMILY Protein kinase-like (PK-like) 133 432 IPR011009 -
Aed3g0007 483 ProSitePatterns Protein kinases ATP-binding region signature. 166 188 IPR017441 GO:0005524
Aed3g0007 483 MobiDBLite consensus disorder prediction 442 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed3g0007 Aed-Chr3 68197 71801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed3g0007 46 483 Receptor kinase-like Gene Family AT1G25390 57.556 7.35e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Aed3g0007 PK_Tyr_Ser-Thr 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed3g0007 - - gmx:100305407 726.857