Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2717 ATGGGTGACTCAAATGACCATTTGGGTGAATCCCCAGCCGTTGAGTTAACCGGAAAGATAATGATTGTGGTTATAATAATCATGTTCTTCGTTATTGTAATTGCTCTTTGCCTTCATATCTTCACCAGAAACTTTTGGTGGCGCAGCCCTGCCCCCAGCCGGCGCCGCCGCTTTGTGTTTTCGTCGTCGTCGTCAACTGGTCAAGAGGGAAGCGGACTGGATCCGGCGGTCCTCAGCTCCCTTCCGGTGTTGGTATTCCAAGGCCAAGACTTGAAGGATGGTTTGGAATGTGCTGTTTGCCTATCCGAGCTTGTGGAAGGAGAAAAGGCGAGGCTTTTGCCTAAATGCAATCATGGGTTCCACGTTGGTTGTATTGACATGTGGTTCCAATCCCATTCCACCTGCCCTCTTTGCAGGAATCCCGTTGTTGCATCAGAATCAGAATCAGAATCTCCCACTTTTCCCACAAACGTCTTGGTTTGGGGGGACAACACCCAAATAAGTTCTACGTTGGAGGAACCTTCCTCTTCCTCCTCTCCTGGAACAACGTTGGTGATTGAAATACCAACTTCAAGCTCTTTGTCTGAAGATGACCTCAAATCGCCTCCTATGGCAGGAACAGGAAGACTGAGGTCACTCAAGAGGCTTTTAAGCAGAGACACAAGGTTAAATCCATGGACGAGTACTTCTCCGGATCTGGAACAACAAGCTCCAGGACACACCTCAGGACCTCCGCTGACTTAG 744 0.4906 MGDSNDHLGESPAVELTGKIMIVVIIIMFFVIVIALCLHIFTRNFWWRSPAPSRRRRFVFSSSSSTGQEGSGLDPAVLSSLPVLVFQGQDLKDGLECAVCLSELVEGEKARLLPKCNHGFHVGCIDMWFQSHSTCPLCRNPVVASESESESPTFPTNVLVWGDNTQISSTLEEPSSSSSPGTTLVIEIPTSSSLSEDDLKSPPMAGTGRLRSLKRLLSRDTRLNPWTSTSPDLEQQAPGHTSGPPLT 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2717 247 MobiDBLite consensus disorder prediction 221 247 - -
Aed2g2717 247 MobiDBLite consensus disorder prediction 189 247 - -
Aed2g2717 247 ProSiteProfiles Zinc finger RING-type profile. 97 139 IPR001841 -
Aed2g2717 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 149 IPR013083 -
Aed2g2717 247 SMART ring_2 97 138 IPR001841 -
Aed2g2717 247 SUPERFAMILY RING/U-box 77 145 - -
Aed2g2717 247 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 228 IPR044675 -
Aed2g2717 247 Pfam Ring finger domain 96 139 IPR001841 -
Aed2g2717 247 CDD RING-H2_EL5_like 96 139 - -
Aed2g2717 247 PANTHER RING-H2 FINGER PROTEIN ATL3 4 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2717 Aed-Chr2 29168447 29169190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2717 15 224 C3H Transcription Factor Family AT1G53820 39.384 3.57e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2717 - - gmx:100797420 278.485