Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2715 ATGGCAACTGATCACGACGAAGACGATTTCAAGGATGAGAAGAATCCCCGTCCCCTGGACGAGGATGACATCGCTCTTCTCAAAACCTATGGTTTGGGGCCTTATTCCACAAGCATAAAAAAAGCCGAGAAGGAAATAAAAGACATGGCAAAAAAGGTCAATGATTTATGTGGTATCAAGGAGTCTGATACTGGTTTGGCTGCACCAAGCCAGTGGGATCTTGTTTCTGATAAACAAATGATGCAGGAGGAGCAGCCTCTTCAGGTAGCAAGGTGCACAAAGATCATAAATCCAAACTCAGAAGATGCCAAATATTTTGTTGTTGGGCTGGGTGACAAAGTTTCACCCACTGACATAGAGGAAGGGATGCGTGTTGGGGTTGATAGAAACAAATATCAGATTCAAATTCCACTGCCTCCAAAAATTGACCCAAGTGTTACCATGATGACAGTTGAAGAGAAGCCTGATGTGACGTATAATGATGTTGGTGGTTGTAAGGAGCAGATTGAAAAGATGCGAGAAGTTGTTGAGCTTCCCATGCTCCACCCAGAGAAATTCGTTAAACTAGGAATTGATCCTCCTAAGGGAGTTCTTTGCTATGGTCCACCAGGGACTGGCAAAACACTTTTAGCTAGGGCTGTGGCCAATAGGACTGATGCTTGTTTTATAAGGGTTATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGTGCTCGAATGGTTCGCGAACTATTTCAGATGGCCCGTTCAAAGAAGGCATGCATTGTGTTTTTCGATGAAGTTGATGCAATTGGGGGTGCACGATTTGATGATGGTGTTGGCGGTGATAATGAGGTTCAGCGCACTATGCTTGAAATTGTGAATCAGCTTGATGGGTTTGATGCCCGTGGAAACATCAAAGTCTTGATGGCAACTAACAGGCCTGACACTCTAGATCCAGCACTACTACGACCTGGACGATTGGACCGTAAAGTTGAATTTGGCCTTCCTGATTTAGAGAGTAGGACTCAGATATTCAAGATTCACACAAGAACCATGAACTGTGAAAGGGATATCCGCTTTGAACTTTTAGCTCGGCTTTGCCCAAATTCTACTGGGGCCGATATAAGGAGCGTTTGCACTGAAGCTGGTATGTATGCCATTCGAGCCAGAAGGAAGACTGTGACAGAGAAAGACTTCCTTGATGCAGTTAATAAAGTCATCAAAGGATACCAGAAGTTCAGTGCAACTCCCAAGTATATGGTCTACAATTGA 1257 0.4407 MATDHDEDDFKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2715 418 Pfam AAA+ lid domain 352 395 IPR041569 -
Aed2g2715 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 408 IPR027417 -
Aed2g2715 418 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 7 416 - -
Aed2g2715 418 SMART AAA_5 193 332 IPR003593 -
Aed2g2715 418 Gene3D - 150 329 IPR027417 -
Aed2g2715 418 Gene3D - 331 412 - -
Aed2g2715 418 PANTHER 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG A 7 416 - -
Aed2g2715 418 CDD AAA 163 330 - -
Aed2g2715 418 Coils Coil 39 59 - -
Aed2g2715 418 ProSitePatterns AAA-protein family signature. 300 318 IPR003960 GO:0005524|GO:0016887
Aed2g2715 418 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 100 401 IPR005937 GO:0005737|GO:0030163|GO:0036402
Aed2g2715 418 MobiDBLite consensus disorder prediction 1 22 - -
Aed2g2715 418 Pfam ATPase family associated with various cellular activities (AAA) 197 329 IPR003959 GO:0005524|GO:0016887
Aed2g2715 418 Gene3D - 34 149 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2715 Aed-Chr2 29155489 29161472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2715 162 383 Calmodulin-binding Proteins AT3G56690 37.220 1.22e-41 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2715 K03061 - gmx:100796358 825.854