Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2714 ATGGTGGAGTTTCACAGGTTGTTGCTGTGCATCACCACCTGCATTCTTTGTTGGATGCCCAATGGTGCCACTGCCGCCACAGATCCAAATGATGCTGCTGCTATGAGATTTTTGTTTCAAAATATGAACTCACCACCCCAGCTAGGTTGGCCTCCTAATGGTGATGATCCATGTGGACAATCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACAGAGATTAAATTATCTAATCTTGGACTAACTGGATCGTTGCCTTACGGATTACAAGTCTTGACATCTTTGACTGACCTAGACATGAGTAGCAACAGTCTTGGCGGTAGCATACCTTACCAACTTCCCCCATATTTGCAGCGCTTAAATATTGCTCATAATAACATCACAGGGACAGTCCCTTACTCTATTTCTAACTTGACTGCTCTTACAGACCTGAATCTTGGTCACAATCTGCTCCAGCAAGGACTGGGTGTTGACTTTCTTAATCTTTCTACTCTCTCCACATTGGATCTCTCCTTCAATTCTCTAACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACACATAACCACCATGTATCTGCAAAATAACCAGTTTTCAGGCACTGTTGATGTCCTTGCTAATCTGCCTCTGGATAATCTGAACGTGGAAAACAATAATTTTACAGGATGGATACCGGAACGGTTGAAGAACATTAACCTACAGACCGGTGGTAATGCATGGAGCTCAGGGCCTGCACCCCCACCTCCTCCCGGAACACCTCCAGCTCCTAAAAGCAACCAGCACCACAAGTCTGGTGGTGGAAGCTCCACCCCCTCAGATACTGGCAGTGGCAGCAGCTCAGTTGACGAGGACAAAAAGTCTGGTATAGGAGGTGGTGCCATAGCTGGAATTGCGATCTCTGTCATGGTTGTGGGGGCAATAGTAGCATTATTTGTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAGCATGACAATCAGACCTTTGCTCCACTTCCTTCAAATGAAGTGCATGAAGAAAAGTCCATGCAAACTTCCTTTGTAACTGACTTGAAGACATTTGATACTTCTGCCTCTATAAATCTTAAACCCCCACCTATTGATCGTCATAAATCATTTGATAATGAAGAATTCTTAAAGAAGCCCACAATTGTGAAGAAGACTGTAACTGCTCCTGCAAATGTGAAATCATATTCTATTGCTGAACTGCAAATTTCTACTGGCAGCTTCAGTGTGGATCACCTTGTTGGTGAGGGGTCTTTTGGGCGTGTATACCGTGCTCAATTTGATGATGGACAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTGCTTCCCAATGATTTGACAGATGATTTTATCGAAATAATTTCAAACATCTCCATTTTACATCATCCAAATGTGACAGAGCTTGTAGGTTACTGCTCAGAGTATGGGCAACACCTCTTGATCTATGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTCTAGAGTACCTACATGAAGTTAGTTCGCCATCGGTTGTTCATAAGAATATTAAGTCAGCCAACATATTACTTGATACGGAGCTTAATCCTCATCTTTCAGATAGTGGATTGGCAAGTTATATTCCAAATGCAGACCAGATATTGAACCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAGTACACTTTGAAAAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGGCAAGATCGGAGCAGTGTTTGGTTCGATGGGCAACACCCCAACTCCATGATATTGATGCATTAGCTAAAATGGTTGATCCTGCAATGAAAGGGCTCTATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTGCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCATGGAGGATCCCAACGAGGGAGTGATGAGCAAGTTCTACGAGACATCTAA 2166 0.434 MVEFHRLLLCITTCILCWMPNGATAATDPNDAAAMRFLFQNMNSPPQLGWPPNGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGSLPYGLQVLTSLTDLDMSSNSLGGSIPYQLPPYLQRLNIAHNNITGTVPYSISNLTALTDLNLGHNLLQQGLGVDFLNLSTLSTLDLSFNSLTGDLPQTMSSLSHITTMYLQNNQFSGTVDVLANLPLDNLNVENNNFTGWIPERLKNINLQTGGNAWSSGPAPPPPPGTPPAPKSNQHHKSGGGSSTPSDTGSGSSSVDEDKKSGIGGGAIAGIAISVMVVGAIVALFVVKRKSKKSSSDLEKHDNQTFAPLPSNEVHEEKSMQTSFVTDLKTFDTSASINLKPPPIDRHKSFDNEEFLKKPTIVKKTVTAPANVKSYSIAELQISTGSFSVDHLVGEGSFGRVYRAQFDDGQVLAVKKIDSSVLPNDLTDDFIEIISNISILHHPNVTELVGYCSEYGQHLLIYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVSSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQILNHNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRARSEQCLVRWATPQLHDIDALAKMVDPAMKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDHGGSQRGSDEQVLRDI 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2714 721 MobiDBLite consensus disorder prediction 329 345 - -
Aed2g2714 721 ProSiteProfiles Protein kinase domain profile. 415 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2714 721 MobiDBLite consensus disorder prediction 236 287 - -
Aed2g2714 721 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 21 718 - -
Aed2g2714 721 Gene3D Transferase(Phosphotransferase) domain 1 494 709 - -
Aed2g2714 721 Gene3D Phosphorylase Kinase; domain 1 377 492 - -
Aed2g2714 721 SUPERFAMILY Protein kinase-like (PK-like) 397 687 IPR011009 -
Aed2g2714 721 Gene3D Ribonuclease Inhibitor 28 249 IPR032675 -
Aed2g2714 721 MobiDBLite consensus disorder prediction 259 285 - -
Aed2g2714 721 MobiDBLite consensus disorder prediction 699 721 - -
Aed2g2714 721 MobiDBLite consensus disorder prediction 244 258 - -
Aed2g2714 721 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Aed2g2714 721 Pfam Protein tyrosine and serine/threonine kinase 418 687 IPR001245 GO:0004672|GO:0006468
Aed2g2714 721 PANTHER OS01G0253100 PROTEIN 21 718 IPR045271 GO:0004714|GO:0006468
Aed2g2714 721 SUPERFAMILY L domain-like 27 232 - -
Aed2g2714 721 MobiDBLite consensus disorder prediction 321 345 - -
Aed2g2714 721 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2714 Aed-Chr2 29144314 29157224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2714 1 700 Strubbelig Receptor Gene Family AT1G53730 66.054 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Aed2g2714 PK_Tyr_Ser-Thr 6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2714 - - gmx:100807707 1291.17