Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2713 ATGGGTGGATCGGAGGAGAGAATAACATCGCGAGGAGGACTTTCATCTGATGATGCTGAAGCCCGGATAGAGATATTTGGCCCAAACAAACTTGAAGAGAAGAAAGAGAATAAAATATTGAAATTTCTTAGTTTTATGTGGAATCCTCTCTCATGGGTTACGGAAGCAGCAGCATTGATGGCGATTATCCTTGCTAATGGCGGAGGGGAAGGTCCTGATTGGCAAGACTTTATAGGGATTATATGCCTACTGGTAATAAACTCAACTATAAGTTTTATAGAAGAAAATAATGCAGGTCATGCTGCAGCAGCACTGATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTCAGAGATGGGCAGTGGCAAGAGCAAGATGCAGCTATTTTAGTACCTGGAGATATAATTAGCATAAAGCTGGGAGATATAATTCCAGCTGATGCTCGCTTGCTAGAAGGGGACCCTCTAAAAATTGATCAGTCAGCCCTTACTGGAGAATCTCTACCTGTCACAAAGAGAACTGGTGACGAGGTATTTTCAGGTTCAACATGTAAACATGGAGAGATTGAATCTGTAGTGATAGCAACAGGAGTTCACTCTTTTTTTGGAAAGGCAGCATACCTGGTTGACAGTACCGAAGTTGTTGGACATTTTCAGAAGGTCCTTACCGCAATTGGTAACTTCTGCATTTGCTCTATAGCTATAGGGATGATTTTTGAAATTCTTATAATGTTCCCAGTGGAGCATCGATCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTAATTGGAGGAATACCCATCGCTATGCCAACTGTATTATCTGTAACACTTGCAATTGGCTCTCACCGTCTTTCTCAACAGGGAGCTATCACAAAAAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACTGGAACTCTTACACTGAATCGCCTAACTGTTGATCGAAACCTTATTGAGGTCTTTAACAGAAATATGGACAAGGATACGGTTGTTCTACTTGCAGCCAGAGCAGCTAGACTAGAAAACCAGGATGCTATTGATACCGCTGTAGTTAATATGCTAGCTGATCCAAAGGAGGTGGCCACCTTAATTGCTGTGTATGCATACATGAGCTTTGCTAAAATAAGCGGAATTGGATGGCGATGGGCTGGTGTTATATGGTTATACAGCATAATCTTCTATGTACCATTGGACATTATTAAGTTCACAGTGCGCTATGCATTGAGTGGAGATGCATGGAAACTCATATTTGAGAGAAAGACAGCTTTTACATCTAAGAAAGACTATGGAAAAGAAGATAGGGCTGCAAAGTGGGTTCTTTCTCAGAGGAGTCTGCAAGGACTGCATCATGATCTGCAGCTCACCGGAGCCGGAGCCGGAGGAGAGGCCTCCGTCAATGGAAGGCGCTCTTCTTTGATAGCTGAACAGGCCAGACGACGTGCTGAAATAGCCAGGCTGGGGGAGTTACACACTCTCAGAGGACATGTTGAGTCTGTCGTCAGACTCAAAAATTTAGACCGCAGTGTCATCCAATCAGCTCATACAGTCTAA 1578 0.4322 MGGSEERITSRGGLSSDDAEARIEIFGPNKLEEKKENKILKFLSFMWNPLSWVTEAAALMAIILANGGGEGPDWQDFIGIICLLVINSTISFIEENNAGHAAAALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKRTGDEVFSGSTCKHGEIESVVIATGVHSFFGKAAYLVDSTEVVGHFQKVLTAIGNFCICSIAIGMIFEILIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDTVVLLAARAARLENQDAIDTAVVNMLADPKEVATLIAVYAYMSFAKISGIGWRWAGVIWLYSIIFYVPLDIIKFTVRYALSGDAWKLIFERKTAFTSKKDYGKEDRAAKWVLSQRSLQGLHHDLQLTGAGAGGEASVNGRRSSLIAEQARRRAEIARLGELHTLRGHVESVVRLKNLDRSVIQSAHTV 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2713 525 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 80 329 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aed2g2713 525 Gene3D - 320 381 IPR023299 GO:0000166
Aed2g2713 525 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 303 IPR023298 -
Aed2g2713 525 Gene3D - 305 319 IPR023214 -
Aed2g2713 525 SUPERFAMILY Calcium ATPase, transduction domain A 111 207 IPR008250 -
Aed2g2713 525 PANTHER CALCIUM-TRANSPORTING ATPASE 8 368 - -
Aed2g2713 525 ProSitePatterns E1-E2 ATPases phosphorylation site. 310 316 IPR018303 -
Aed2g2713 525 Gene3D - 477 525 - -
Aed2g2713 525 Gene3D - 73 304 - -
Aed2g2713 525 PRINTS P-type cation-transporting ATPase superfamily signature 158 172 - -
Aed2g2713 525 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Aed2g2713 525 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 369 506 - -
Aed2g2713 525 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 8 368 - -
Aed2g2713 525 SMART Cation_ATPase_N_a_2 4 66 IPR004014 -
Aed2g2713 525 Pfam Cation transporter/ATPase, N-terminus 10 60 IPR004014 -
Aed2g2713 525 Pfam E1-E2 ATPase 109 287 - -
Aed2g2713 525 PANTHER CALCIUM-TRANSPORTING ATPASE 369 506 - -
Aed2g2713 525 Gene3D - 111 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2713 Aed-Chr2 29133444 29141751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2713 369 525 Primary Pumps ATPases AT2G07560 53.503 2.31e-47 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2713 K01535 - gmx:100795836 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2713 2 29133444 29141751 Aed2g2713 2 29133444 29141751 ECH