Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed2g2712 | ATGACACTGCACATGGTCGTCTTTGTCACAGTACTGTTCCTTGTTCTGTCTGGATTCTCAACTGTTCAAGCTTCCTCCTCCTCGTGTGACCAACAGGATAGAGACTCTCTCTTGGCCTTCTCCAGGAACATATTCTCTCCTTCTCCTCTCAATTGGTCTGCTTCTGTTGATTGCTGTTCCTGGGAAGGCATTGTCTGTGATCATAATCTCAGCAGAGTCATACATCTATTGCTTCCATCCAGGTCTCTCACACTCACTGCTCCCTTCATCTCCCCATCTCTCATTAACCTCACTGCTCTCTCCCGTCTTAATCTCTCCCATAACCACTTTTCTGCTAATCTCCCCAACAATTTCTTCTCACTTCTTAACCACCTTCACATTCTTGATTTAAGCTTCAATCGTTTCTCTGGTCAATTGCCACCCTTTCTCACTAATGCCAATGCCAATACCAATACCATCCCTCTCCGCTACCTAGACCTGTCTAGTAATTTATTCCACGGACCTCTCCCACCTTCTCTCCTTCAGCATCTCTCCAGAGGAACTACTTTGACCTCTTTTAATGTTAGTAACAACAGCTTCACAGGTCAAATTCCCACTTCTCTCTTCTGCAGTAGCTCCTTCGATTATTCCTCCAATGATTTCACAGGCACCATTCTCCCTGGACTAGGAGCATGTTCTAAGCTGGAGACATTTCGAGCAGGTTCCAATTCCCTATCCGGGCCCCTTCCTGCTGATATTTTTAATGCTCTTGCTCTCACACAAATCTCCTTGCCCCTCAATAAACTCAATGGAACCATTGGTGAGGCCATTGTTAACCTTTCCAACCTTACAGTTTTGGAGCTCTACTCCAATAATTTCACTGGGCCCATTCCCTCAGATATTGGTAAGCTCTCCAAATTGGAACGCTTACTCCTTCATGCCAACAATATAACTGGTACTCTGCCCCCATCTCTGATGGACTGTGTCAATCTTGTCATGTTGGATGTAAGGCTCAACTTGTTGGGGGGAGACCTCTCAGCATTGAATTTCTCTGGACTCCTCAGACTCACAGCACTTGACCTCGGCAACAACAGCTTTACCGGTATTCTACCACCAACCCTTTATGCCTGTAAGTCACTTAAAGCAGTCAGGCTTGCATCTAATCAGTTTCAGGGACACATCTCACCTAACATACTTGGACTTCAGTCTCTGGCTTTCTTATCACTTTCTACCAACAACCTCAGTAATGTCACTGGGGCTCTCAAGTTACTCATGGAACTCAAGAACCTTAGTACGCTGATGCTCTCCCAGAATTTTTTCAATGAAATTATGCCGGATGATGTCAACATAACAAATCCAGATGGATTCCAAAAGATCCAAGTTTTAGCATTGGGTGGTTGTAATTTCACAGGCCAAATACCACGCTGGCTTGTTAATCTGAAGAAGCTCGAGGTCTTGGATTTGTCCTATAATCAAATTAGTGGTTCAATTCCTCCTTGGTTGTACATACTTCCTGAGCTTTTCTATATAGACTTGTCTTTTAACCGCCTCACGGGAATATTTCCAACTGAGTTCACAAGGCTTCCAGCACTGACATCACAAAAGGCATATGATGAAGTAGAAAGGACTTACCTGGAGTTACCTCTCTTTGCTAATGCCAACAATGTTTCTCAGATGCAATATAATCAGATTTCCAACCTACCACCAGCAATATATCTGGGAAACAATAGCCTCAATGGCATGTTGATAGTTTGGATAATATCCAAGAGGAGGATAAATCCAGGAGGAGGAGGAGGAGACAAGATTGAACTAGAATCAATTTCTGTCAGCTCTTACAGCAGTGGGATTCATCCTGAGGTTGAGAAAGAGGGAAGCCTAGTGGTACTGTTCCCTAACAAAAAAAATGAAATCAAGGACCTTAGCATATTTGAAATATTAAAAGCCACAGAAAATTTCAGTCAGGCGAACATAATAGGATGTGGGGGTTTTGGTTTGGTATATAAAGCAACGTTACCAAATGGAAGTGCTGTGGCCATCAAGAAACTTTCAGGAGATATGGGTCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCATTGTCGACAGCACAGCATGAAAATGTGGTTGCATTGCAAGGAGGGAAGGGCTTTGAAGAAGAGATGCAACAGGTTCTTGATGTGGCCTGCATGTGTGTCAACCTTAATCCTTTCAAGAGACCAAGCATCAGACAAGTTGTTGAACGCCTCAAGAATGTAGTTGATGGCCAGATTGTAGAAAAGGCAGAGCAGTGTCTGAGTCAGTGA | 2283 | 0.4363 | MTLHMVVFVTVLFLVLSGFSTVQASSSSCDQQDRDSLLAFSRNIFSPSPLNWSASVDCCSWEGIVCDHNLSRVIHLLLPSRSLTLTAPFISPSLINLTALSRLNLSHNHFSANLPNNFFSLLNHLHILDLSFNRFSGQLPPFLTNANANTNTIPLRYLDLSSNLFHGPLPPSLLQHLSRGTTLTSFNVSNNSFTGQIPTSLFCSSSFDYSSNDFTGTILPGLGACSKLETFRAGSNSLSGPLPADIFNALALTQISLPLNKLNGTIGEAIVNLSNLTVLELYSNNFTGPIPSDIGKLSKLERLLLHANNITGTLPPSLMDCVNLVMLDVRLNLLGGDLSALNFSGLLRLTALDLGNNSFTGILPPTLYACKSLKAVRLASNQFQGHISPNILGLQSLAFLSLSTNNLSNVTGALKLLMELKNLSTLMLSQNFFNEIMPDDVNITNPDGFQKIQVLALGGCNFTGQIPRWLVNLKKLEVLDLSYNQISGSIPPWLYILPELFYIDLSFNRLTGIFPTEFTRLPALTSQKAYDEVERTYLELPLFANANNVSQMQYNQISNLPPAIYLGNNSLNGMLIVWIISKRRINPGGGGGDKIELESISVSSYSSGIHPEVEKEGSLVVLFPNKKNEIKDLSIFEILKATENFSQANIIGCGGFGLVYKATLPNGSAVAIKKLSGDMGLMEREFKAEVEALSTAQHENVVALQGGKGFEEEMQQVLDVACMCVNLNPFKRPSIRQVVERLKNVVDGQIVEKAEQCLSQ | 760 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed2g2712 | 760 | PRINTS | Leucine-rich repeat signature | 473 | 486 | - | - | |
Aed2g2712 | 760 | PRINTS | Leucine-rich repeat signature | 349 | 362 | - | - | |
Aed2g2712 | 760 | PANTHER | OS02G0155400 PROTEIN | 707 | 742 | - | - | |
Aed2g2712 | 760 | PANTHER | OS02G0155400 PROTEIN | 606 | 706 | - | - | |
Aed2g2712 | 760 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 17 | 576 | - | - | |
Aed2g2712 | 760 | Gene3D | Phosphorylase Kinase; domain 1 | 610 | 718 | - | - | |
Aed2g2712 | 760 | SUPERFAMILY | Protein kinase-like (PK-like) | 630 | 706 | IPR011009 | - | |
Aed2g2712 | 760 | Pfam | Leucine rich repeat N-terminal domain | 31 | 67 | IPR013210 | - | |
Aed2g2712 | 760 | Pfam | Protein tyrosine and serine/threonine kinase | 648 | 707 | IPR001245 | GO:0004672|GO:0006468 | |
Aed2g2712 | 760 | SUPERFAMILY | L domain-like | 206 | 531 | - | - | |
Aed2g2712 | 760 | ProSiteProfiles | Protein kinase domain profile. | 645 | 760 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed2g2712 | 760 | SUPERFAMILY | L domain-like | 34 | 291 | - | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 420 | 443 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 394 | 416 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 97 | 121 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 122 | 146 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 297 | 321 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 273 | 296 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 497 | 520 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 346 | 370 | IPR003591 | - | |
Aed2g2712 | 760 | SMART | LRR_typ_2 | 473 | 494 | IPR003591 | - | |
Aed2g2712 | 760 | ProSitePatterns | Protein kinases ATP-binding region signature. | 651 | 674 | IPR017441 | GO:0005524 | |
Aed2g2712 | 760 | Gene3D | Ribonuclease Inhibitor | 25 | 89 | IPR032675 | - | |
Aed2g2712 | 760 | Gene3D | Ribonuclease Inhibitor | 345 | 586 | IPR032675 | - | |
Aed2g2712 | 760 | Pfam | Leucine Rich Repeat | 348 | 368 | IPR001611 | GO:0005515 | |
Aed2g2712 | 760 | Pfam | Leucine rich repeat | 451 | 510 | IPR001611 | GO:0005515 | |
Aed2g2712 | 760 | ProSiteProfiles | Leucine-rich repeat profile. | 475 | 498 | IPR001611 | GO:0005515 | |
Aed2g2712 | 760 | Gene3D | Ribonuclease Inhibitor | 90 | 344 | IPR032675 | - | |
Aed2g2712 | 760 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 606 | 706 | - | - | |
Aed2g2712 | 760 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 707 | 742 | - | - | |
Aed2g2712 | 760 | PANTHER | OS02G0155400 PROTEIN | 17 | 576 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed2g2712 | Aed-Chr2 | 29121624 | 29125087 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed2g2712 | 3 | 573 | Miscellaneous Gene Families | AT1G17250 | 50.517 | 6.55e-173 | 513 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xb-1 | Aed2g2712 | PK_Tyr_Ser-Thr | 3.1e-05 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed2g2712 | - | - | gmx:100782574 | 918.302 |