Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2712 ATGACACTGCACATGGTCGTCTTTGTCACAGTACTGTTCCTTGTTCTGTCTGGATTCTCAACTGTTCAAGCTTCCTCCTCCTCGTGTGACCAACAGGATAGAGACTCTCTCTTGGCCTTCTCCAGGAACATATTCTCTCCTTCTCCTCTCAATTGGTCTGCTTCTGTTGATTGCTGTTCCTGGGAAGGCATTGTCTGTGATCATAATCTCAGCAGAGTCATACATCTATTGCTTCCATCCAGGTCTCTCACACTCACTGCTCCCTTCATCTCCCCATCTCTCATTAACCTCACTGCTCTCTCCCGTCTTAATCTCTCCCATAACCACTTTTCTGCTAATCTCCCCAACAATTTCTTCTCACTTCTTAACCACCTTCACATTCTTGATTTAAGCTTCAATCGTTTCTCTGGTCAATTGCCACCCTTTCTCACTAATGCCAATGCCAATACCAATACCATCCCTCTCCGCTACCTAGACCTGTCTAGTAATTTATTCCACGGACCTCTCCCACCTTCTCTCCTTCAGCATCTCTCCAGAGGAACTACTTTGACCTCTTTTAATGTTAGTAACAACAGCTTCACAGGTCAAATTCCCACTTCTCTCTTCTGCAGTAGCTCCTTCGATTATTCCTCCAATGATTTCACAGGCACCATTCTCCCTGGACTAGGAGCATGTTCTAAGCTGGAGACATTTCGAGCAGGTTCCAATTCCCTATCCGGGCCCCTTCCTGCTGATATTTTTAATGCTCTTGCTCTCACACAAATCTCCTTGCCCCTCAATAAACTCAATGGAACCATTGGTGAGGCCATTGTTAACCTTTCCAACCTTACAGTTTTGGAGCTCTACTCCAATAATTTCACTGGGCCCATTCCCTCAGATATTGGTAAGCTCTCCAAATTGGAACGCTTACTCCTTCATGCCAACAATATAACTGGTACTCTGCCCCCATCTCTGATGGACTGTGTCAATCTTGTCATGTTGGATGTAAGGCTCAACTTGTTGGGGGGAGACCTCTCAGCATTGAATTTCTCTGGACTCCTCAGACTCACAGCACTTGACCTCGGCAACAACAGCTTTACCGGTATTCTACCACCAACCCTTTATGCCTGTAAGTCACTTAAAGCAGTCAGGCTTGCATCTAATCAGTTTCAGGGACACATCTCACCTAACATACTTGGACTTCAGTCTCTGGCTTTCTTATCACTTTCTACCAACAACCTCAGTAATGTCACTGGGGCTCTCAAGTTACTCATGGAACTCAAGAACCTTAGTACGCTGATGCTCTCCCAGAATTTTTTCAATGAAATTATGCCGGATGATGTCAACATAACAAATCCAGATGGATTCCAAAAGATCCAAGTTTTAGCATTGGGTGGTTGTAATTTCACAGGCCAAATACCACGCTGGCTTGTTAATCTGAAGAAGCTCGAGGTCTTGGATTTGTCCTATAATCAAATTAGTGGTTCAATTCCTCCTTGGTTGTACATACTTCCTGAGCTTTTCTATATAGACTTGTCTTTTAACCGCCTCACGGGAATATTTCCAACTGAGTTCACAAGGCTTCCAGCACTGACATCACAAAAGGCATATGATGAAGTAGAAAGGACTTACCTGGAGTTACCTCTCTTTGCTAATGCCAACAATGTTTCTCAGATGCAATATAATCAGATTTCCAACCTACCACCAGCAATATATCTGGGAAACAATAGCCTCAATGGCATGTTGATAGTTTGGATAATATCCAAGAGGAGGATAAATCCAGGAGGAGGAGGAGGAGACAAGATTGAACTAGAATCAATTTCTGTCAGCTCTTACAGCAGTGGGATTCATCCTGAGGTTGAGAAAGAGGGAAGCCTAGTGGTACTGTTCCCTAACAAAAAAAATGAAATCAAGGACCTTAGCATATTTGAAATATTAAAAGCCACAGAAAATTTCAGTCAGGCGAACATAATAGGATGTGGGGGTTTTGGTTTGGTATATAAAGCAACGTTACCAAATGGAAGTGCTGTGGCCATCAAGAAACTTTCAGGAGATATGGGTCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCATTGTCGACAGCACAGCATGAAAATGTGGTTGCATTGCAAGGAGGGAAGGGCTTTGAAGAAGAGATGCAACAGGTTCTTGATGTGGCCTGCATGTGTGTCAACCTTAATCCTTTCAAGAGACCAAGCATCAGACAAGTTGTTGAACGCCTCAAGAATGTAGTTGATGGCCAGATTGTAGAAAAGGCAGAGCAGTGTCTGAGTCAGTGA 2283 0.4363 MTLHMVVFVTVLFLVLSGFSTVQASSSSCDQQDRDSLLAFSRNIFSPSPLNWSASVDCCSWEGIVCDHNLSRVIHLLLPSRSLTLTAPFISPSLINLTALSRLNLSHNHFSANLPNNFFSLLNHLHILDLSFNRFSGQLPPFLTNANANTNTIPLRYLDLSSNLFHGPLPPSLLQHLSRGTTLTSFNVSNNSFTGQIPTSLFCSSSFDYSSNDFTGTILPGLGACSKLETFRAGSNSLSGPLPADIFNALALTQISLPLNKLNGTIGEAIVNLSNLTVLELYSNNFTGPIPSDIGKLSKLERLLLHANNITGTLPPSLMDCVNLVMLDVRLNLLGGDLSALNFSGLLRLTALDLGNNSFTGILPPTLYACKSLKAVRLASNQFQGHISPNILGLQSLAFLSLSTNNLSNVTGALKLLMELKNLSTLMLSQNFFNEIMPDDVNITNPDGFQKIQVLALGGCNFTGQIPRWLVNLKKLEVLDLSYNQISGSIPPWLYILPELFYIDLSFNRLTGIFPTEFTRLPALTSQKAYDEVERTYLELPLFANANNVSQMQYNQISNLPPAIYLGNNSLNGMLIVWIISKRRINPGGGGGDKIELESISVSSYSSGIHPEVEKEGSLVVLFPNKKNEIKDLSIFEILKATENFSQANIIGCGGFGLVYKATLPNGSAVAIKKLSGDMGLMEREFKAEVEALSTAQHENVVALQGGKGFEEEMQQVLDVACMCVNLNPFKRPSIRQVVERLKNVVDGQIVEKAEQCLSQ 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2712 760 PRINTS Leucine-rich repeat signature 473 486 - -
Aed2g2712 760 PRINTS Leucine-rich repeat signature 349 362 - -
Aed2g2712 760 PANTHER OS02G0155400 PROTEIN 707 742 - -
Aed2g2712 760 PANTHER OS02G0155400 PROTEIN 606 706 - -
Aed2g2712 760 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 17 576 - -
Aed2g2712 760 Gene3D Phosphorylase Kinase; domain 1 610 718 - -
Aed2g2712 760 SUPERFAMILY Protein kinase-like (PK-like) 630 706 IPR011009 -
Aed2g2712 760 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Aed2g2712 760 Pfam Protein tyrosine and serine/threonine kinase 648 707 IPR001245 GO:0004672|GO:0006468
Aed2g2712 760 SUPERFAMILY L domain-like 206 531 - -
Aed2g2712 760 ProSiteProfiles Protein kinase domain profile. 645 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2712 760 SUPERFAMILY L domain-like 34 291 - -
Aed2g2712 760 SMART LRR_typ_2 420 443 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 394 416 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 97 121 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 122 146 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 297 321 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 273 296 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 497 520 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 346 370 IPR003591 -
Aed2g2712 760 SMART LRR_typ_2 473 494 IPR003591 -
Aed2g2712 760 ProSitePatterns Protein kinases ATP-binding region signature. 651 674 IPR017441 GO:0005524
Aed2g2712 760 Gene3D Ribonuclease Inhibitor 25 89 IPR032675 -
Aed2g2712 760 Gene3D Ribonuclease Inhibitor 345 586 IPR032675 -
Aed2g2712 760 Pfam Leucine Rich Repeat 348 368 IPR001611 GO:0005515
Aed2g2712 760 Pfam Leucine rich repeat 451 510 IPR001611 GO:0005515
Aed2g2712 760 ProSiteProfiles Leucine-rich repeat profile. 475 498 IPR001611 GO:0005515
Aed2g2712 760 Gene3D Ribonuclease Inhibitor 90 344 IPR032675 -
Aed2g2712 760 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 606 706 - -
Aed2g2712 760 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 707 742 - -
Aed2g2712 760 PANTHER OS02G0155400 PROTEIN 17 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2712 Aed-Chr2 29121624 29125087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2712 3 573 Miscellaneous Gene Families AT1G17250 50.517 6.55e-173 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aed2g2712 PK_Tyr_Ser-Thr 3.1e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2712 - - gmx:100782574 918.302