Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2707 ATGTCATCACGTATTGATATCCATGTCCTCCTCCTCCTTCTCCTGACTAGTAGTATTGCTGTGTTCTCTTGCAATGAAACATGCGGGGAGCTCCATGTCCCATTTCCATTCTATGTGAAAACTTCATGTGAGTCGTCAATCTCCAGCAGCAGCAGCTTCCATCTCTCATGCTCAAATTCCTCTACCCTTTTACTCAGAATTGGGTCTGTCAGTTACACTGTCTTGGAATTCTTCTCAGATGGCGGCCTGCTCGTAGACTTTCCAGGCTCAGGCTCATCCTCCTGTAGACAGTACAACGACTTGAATTCTTTTGGCAACAGCAGGAAGGACAAGTTTGACTTTGACTACTTTGGAGTGTCGGTTGACAATGTTATTGGGCTCTATGACTGTGAGGATTCTTCTCTGTGCAAGGCAGATTGCGAGACTATTGACCTACCTGGATGCGATGGAAAGCCTGGAGGCTCTCTTGCCTGCTGCTATCCACTCTCTGACCATGACAATACCGTGTGGCACGTTGGAGATGGCTTTTCGGTGTTCTCTCAGTTTGGATGCAGAGGAGTTTCTAGTTGGGCTGTTCTGCGAGGCTCAACTTGGGGCAAACGTGGGGTCAAGTTGGACTGGGCACTTCCCAGGAACTCCTCTAGGGATGTTTGTGCAACTCATGCTAACATCGCCAATGCTACTTCAGTTCAAGGAGCCGTCACTTGTCTCTGTCAAACTGGATATCTTGGTGATGGTTTTGCTAATGGAACTGGATGTTTGCAGGTTTGCATCAAGGATGGAAAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACACGATCAAAGGAAATTTGTTTTGATTGCCGGAATCATTGGCCCAGTTCTCATTGTTGCCTCCCTGCTTGCACTGTTTTATCTTCTCAAGAGGCCATCAAAACCAGGGATGTTTGACACCGACCAGGCTTACTATCAAAACATTACAGTACCAAAAGCTTGCAAAACTCGATTATTCAGCCTCCATGAGCTAGAGGAAGCCACTAAAGGTTTTGAAGAGGGTCAGAAACTTATGCATGACAATAATGGGACAATTTTTGCTGGAGTTTTAGGGGAAGGGTCTCACATAGCTGTCCACAAGTTACAATGTGAGAAGAAAGACTTAATACAAGTCCTTTCACAAATCGAGGTTCTATCTTCTGTTGTGCATAGAAACATGGCCCGAATTCTTGGATGCTGTATTGAGTCTGGCAACACTCTGGTAATTTATGAGTATCCTTCCAATGGTACTCTGGAGGAACATTTACATCAAAGCAAAGGACAACAACTTCGTTTAGATTGGTATAGGAGATTGACTATTGCTGCAGAAACAGCTAGTGTTCTTGCATTCTTACACTACGAGAACAATCCTCCCATACTCCACCATAACCTTAAATCTGCCTGCATCTTCCTAGATGATGATTATTCTGTCAAGATTGCAGGATTTGGTCTGATCAACTCCAATTTTTACTATGGTTCTCACTTACACAACTATGAAGGATTTGGCATCTGCAAGAATGATGTTTACAACATGGGTGTGTTGCTTCTTGAGATTATCTCAGGCTCAAATCAGTTGGATTCACCAACTTTGGCCTTACAGCATATAAGGGCTGGAAAATTTGAAGAGATATTTGACCCATTTCTTTGCTATCATGAACAACCACACTATCGGCAAGAGCAAATGCAAATAATTGCAGATCTTGCTACAAGATGCCTGTTATTTGGTGTAGATGGAAGGCTAGGAATGATTGATGTTGTGAGGGAGTTAGTACACATGACTAAAGAAAGTCTTGATGGAGGACCTGCACTGGAGGAGACATTCTCAAACTCAAGCCTTCTTCAGATGATATCGATGTCTCCTGATTCTATGAATGTCCCTTGA 1899 0.4365 MSSRIDIHVLLLLLLTSSIAVFSCNETCGELHVPFPFYVKTSCESSISSSSSFHLSCSNSSTLLLRIGSVSYTVLEFFSDGGLLVDFPGSGSSSCRQYNDLNSFGNSRKDKFDFDYFGVSVDNVIGLYDCEDSSLCKADCETIDLPGCDGKPGGSLACCYPLSDHDNTVWHVGDGFSVFSQFGCRGVSSWAVLRGSTWGKRGVKLDWALPRNSSRDVCATHANIANATSVQGAVTCLCQTGYLGDGFANGTGCLQVCIKDGKEAYGSDCYIKRHDQRKFVLIAGIIGPVLIVASLLALFYLLKRPSKPGMFDTDQAYYQNITVPKACKTRLFSLHELEEATKGFEEGQKLMHDNNGTIFAGVLGEGSHIAVHKLQCEKKDLIQVLSQIEVLSSVVHRNMARILGCCIESGNTLVIYEYPSNGTLEEHLHQSKGQQLRLDWYRRLTIAAETASVLAFLHYENNPPILHHNLKSACIFLDDDYSVKIAGFGLINSNFYYGSHLHNYEGFGICKNDVYNMGVLLLEIISGSNQLDSPTLALQHIRAGKFEEIFDPFLCYHEQPHYRQEQMQIIADLATRCLLFGVDGRLGMIDVVRELVHMTKESLDGGPALEETFSNSSLLQMISMSPDSMNVP 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2707 632 Gene3D Transferase(Phosphotransferase) domain 1 420 607 - -
Aed2g2707 632 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Aed2g2707 632 Pfam Protein tyrosine and serine/threonine kinase 347 493 IPR001245 GO:0004672|GO:0006468
Aed2g2707 632 ProSiteProfiles Protein kinase domain profile. 344 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed2g2707 632 Pfam Wall-associated receptor kinase galacturonan-binding 24 78 IPR025287 GO:0030247
Aed2g2707 632 PANTHER OS10G0351500 PROTEIN 33 627 - -
Aed2g2707 632 SUPERFAMILY Protein kinase-like (PK-like) 327 595 IPR011009 -
Aed2g2707 632 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 627 IPR045274 GO:0007166
Aed2g2707 632 Gene3D Phosphorylase Kinase; domain 1 312 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2707 Aed-Chr2 29039940 29042069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2707 1 595 Receptor kinase-like Gene Family AT2G23450 27.969 1.42e-54 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Aed2g2707 PK_Tyr_Ser-Thr 8.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2707 - - gmx:100779880 1091.26