Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2703 ATGGGTGAAGTAGCGATGCAGGGGGAACAGAGCAGCAATGCCTCCGTGGTTCAGTGGGAACGTTTTCTTCCTCGGATGGTGCTTCGGGTCTTGCTTGTCGAAGCTGATGATTCTACACGCCAGATCATTGCTGCACTTCTCCGTAAATGCAGTTACAAAGTTACCGCGTTTTGTGATGGCTTAAAGGCATGGGAGACATTGAAGAACAAAGCATCTGACATAGATCTCATATTAACGGAAGTGGATTTGCCAGAAATATCTGGTTTTTCACTTCTTACTTCAATCATGGAGCATGACGTTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCAGTTAGCATGGTGTTCAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTATAAAACCTATTCGCAAGAATGAGCTAAGAAACTTGTGGCAGCATGTATGGAGAAGGCACGCTATAAGCAGGCCTCCTCAAAATTTAACACTGCCACAGATTGAACTTGGTTTTGCTGCAGAAAACCATGCTGCAAGCAATAACTCTAGTGGATCTGTGGATTCTACACCAAAAGATTATGAATGCAGTGAGAAAACAAGTGAGGCTCAAGATATATCGCAGCTGAAGAGCTCTTCAAATTTGAGCAATATTGACATAGTGAAGCATGAAAACTCTACCATTTGTGAAAGGGAATCAGATAAGCATAATGATGAAGCTGGAGAGGAATCAATATTTATATCAGAAGATGCAAGGTGCAACAAAACTTTTAAACCAACAGGTTTACGGCTAAGTCAGGGCTATGAGTGCCATGAAACGAGAAGTCAAGATGAAGGTCTAAGAATAGAGTTGAGCAAACCCAATCCTGAGATTAATACAGATATTCATGGATTCAGTGATGAACTGGTAGATCCTTCTACTGGTGCCATTGACTTGATTGCTACATTCAAGAATCTTCCAAAGAGCACCGATGAAAAATGTAGTTTCAGTGGTGGTAACACTGCCAAGTTTGATTTTGATACACAATTGGGACTTTCTTTAAGAAGAGATTTTCCTGGAAGCTCATGTAAAGCTGCATCTGAGGAAATGCAAATACTGAACCATTCAAATGCTTCTGCCTTTTCTAGGTACAATAGTAGTAACTTGTTGCAGCCCCTTTTTCCAACACCATCAACTATCTCTGCTAATTTAACAAATGCCGGTCAGAATTCTCATGAATCCCATAAATTATCAGAAAATGCATCTACTTCTCATCAATATGGTGGAAAAAATCAAAATCAGGAGAAAATCACCATTCCAGTCATTGGTCAGTCTAGACAAGTTGATCCAAATTTACTAAACAGTCAACTTGGATTGTTTCCTGCTAAAGGGGTTACTTCTGATCACAAGTCTACAGGAAATGGAAATGTGTTCCCTACTATGCTTTATGCACAATCAGGTGTCCATCCCAAATGGACTCCAAAATCAGTGTGCCAGAAAGAGAGTTCTCCATTTCCCACAAGCACTTCATCCCAGTCCCATCCTCAAAGTCACAAGTCAGAACGTCATCACTGGTCGGAAGATGCAATCCATGCTTCTGATCAATGTAATTTGGATCGTGAGACACATGAATCTCCTCAGTCTCCTGCTGCTAGTCAGAGTGCTGGTACTAGTTTTTACCACGACACAGCAAATCATAATAGTAGTGATGTATACAGAAGCATAGGCTGCAGAAGCGATGTAAATTCTACTTCAGCTAAGGTAGCCAAGGACAGCCATGAAAGTTTTATTGATAGTGGTCACCGCAGCTATGAAGGATTCATAGGGACAGATTCTAATCGCACCAGTCAACGAGAAGCAGCTCTAACAAAGTTTAGACTGAAGCGGAAAGACAGATGCTATGAGAAAAAGGTGCGATATCAAAGCCGAAAGAGATTGGCAGAGAAACGCCCTAGGGTGAAAGGGCAATTTGTTCGCCAAGTGCACAATGATGATCCAATAGCAGATGTGGGCGGTGGTTCCTGA 1992 0.4137 MGEVAMQGEQSSNASVVQWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYKVTAFCDGLKAWETLKNKASDIDLILTEVDLPEISGFSLLTSIMEHDVCKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPIRKNELRNLWQHVWRRHAISRPPQNLTLPQIELGFAAENHAASNNSSGSVDSTPKDYECSEKTSEAQDISQLKSSSNLSNIDIVKHENSTICERESDKHNDEAGEESIFISEDARCNKTFKPTGLRLSQGYECHETRSQDEGLRIELSKPNPEINTDIHGFSDELVDPSTGAIDLIATFKNLPKSTDEKCSFSGGNTAKFDFDTQLGLSLRRDFPGSSCKAASEEMQILNHSNASAFSRYNSSNLLQPLFPTPSTISANLTNAGQNSHESHKLSENASTSHQYGGKNQNQEKITIPVIGQSRQVDPNLLNSQLGLFPAKGVTSDHKSTGNGNVFPTMLYAQSGVHPKWTPKSVCQKESSPFPTSTSSQSHPQSHKSERHHWSEDAIHASDQCNLDRETHESPQSPAASQSAGTSFYHDTANHNSSDVYRSIGCRSDVNSTSAKVAKDSHESFIDSGHRSYEGFIGTDSNRTSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEKRPRVKGQFVRQVHNDDPIADVGGGS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2703 663 Pfam CCT motif 607 649 IPR010402 GO:0005515
Aed2g2703 663 SUPERFAMILY CheY-like 28 159 IPR011006 -
Aed2g2703 663 MobiDBLite consensus disorder prediction 390 421 - -
Aed2g2703 663 Gene3D - 26 241 - -
Aed2g2703 663 MobiDBLite consensus disorder prediction 485 504 - -
Aed2g2703 663 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 195 IPR045279 GO:0009736
Aed2g2703 663 PANTHER TWO-COMPONENT RESPONSE REGULATOR 199 640 IPR045279 GO:0009736
Aed2g2703 663 CDD psREC_PRR 30 133 - -
Aed2g2703 663 PANTHER PRR RESPONSE REGULATOR 20 195 - -
Aed2g2703 663 ProSiteProfiles Response regulatory domain profile. 29 147 IPR001789 GO:0000160
Aed2g2703 663 ProSiteProfiles CCT domain profile. 607 649 IPR010402 GO:0005515
Aed2g2703 663 Pfam Response regulator receiver domain 30 141 IPR001789 GO:0000160
Aed2g2703 663 SMART REC_2 28 143 IPR001789 GO:0000160
Aed2g2703 663 PANTHER PRR RESPONSE REGULATOR 199 640 - -
Aed2g2703 663 MobiDBLite consensus disorder prediction 480 514 - -
Aed2g2703 663 MobiDBLite consensus disorder prediction 528 552 - -
Aed2g2703 663 MobiDBLite consensus disorder prediction 175 207 - -
Aed2g2703 663 MobiDBLite consensus disorder prediction 531 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2703 Aed-Chr2 29015957 29020788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2703 606 651 Response Regulator Gene Family AT5G24470 86.957 6.52e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Aed2g2703 Response_reg 2.6e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2703 K12130 - gmx:100779346 1090.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2703 2 29015957 29020788 Aed2g2703 2 29015957 29020788 ECH