Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2687 ATGATGGGTGGAGGAGTGCCGAAAGGGTGTTTGGCAATAAAAGTGGGGCAAGAGAAAGAAAGGTTCGTGGTGCCGGTGATGTATTTCAAACACCCCCTCTTCGTGGAGCTTCTGAAGGAAGCAGAGGAAGAGTACGGTTTCGATCACAAAGGAACCATTACCATCCCTTGTCATGTCGACCACTTTAGGAACGTCAGAGGGATTATTCATAACGATTACTCCCTCCGCTGCTTTCGCTTCTCACCTTCTTAA 252 0.4802 MMGGGVPKGCLAIKVGQEKERFVVPVMYFKHPLFVELLKEAEEEYGFDHKGTITIPCHVDHFRNVRGIIHNDYSLRCFRFSPS 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2687 83 Pfam Auxin responsive protein 6 65 IPR003676 GO:0009733
Aed2g2687 83 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 75 IPR003676 GO:0009733
Aed2g2687 83 PANTHER SMALL AUXIN-UP RNA-RELATED 5 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2687 Aed-Chr2 28934730 28934981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2687 6 71 Calmodulin-binding Proteins AT3G43120 53.030 1.54e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2687 K14488 - var:108342322 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2687 2 28934730 28934981 Aed2g0505 2 3592995 3593354 PCT