Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2676 ATGGGAAGAGCTCCTTGTTGCTCTAAAGTAGGGTTGCACAGAGGTCCATGGACTCCTCGAGAAGATGCATTGCTCACCAACTTTATTCAAGCTCATGGAGAAGGCCAGTGGAGATCACTGCCAAAAAGAGCTGGTCTTCTTAGATGTGGAAAAAGTTGCCGACTGAGATGGATGAACTATCTGAGACCCGATATAAAGAGAGGAAACATAAGCCCAGAAGAAGATGATCTTATTATTAGAATGCATTCACTTTTAGGAAATAGATGGTCCCTCATTGCGGGAAGATTACCAGGACGAACAGATAATGAGATTAAGAACTACTGGAATACCCATCTCAGTAAGAAGCTCAGAATTCAAGGAACGGATCCAAAGACACACCAGAAGATCATAACTGATCAAGCAGTACCAGAGAAGAACAAGAAAAAGAATAAGGGCATGAGAAAGAACAATAAGCAAAAGAGTAAACATGATCATAATAACAAAACCTTAGTTTATCTACCAAAACCCATAAGGGTTAAAGCTTTATCATGTATTCCCAGAACTGATAGCACCTTAACCCTTGATTCCAATTCAGCTACTACTACTGCATCAACAAGCCAAGATCAGAAAGTTCAAAGCCCAGAAGCAAAAAAGGTAAACATTATTTGGGGGGTAGGTGACGATGGAGACATTAATGGCGGGATTGGAATATTCTTTGGTGAAGACCATGACCTAGTCAACAGTAGTGCCTCTTATTCTGATGATGTTCACACTCATCATGGTACGCTGGAAAAGCTCTATGAAGAGTACTTGCAGCTCTTGAATGTTGAGGATCAGAAGCCAGATGATCATGAATTAGATTCTTTTGCTCAATCTTTATTGCTGTAA 867 0.4037 MGRAPCCSKVGLHRGPWTPREDALLTNFIQAHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNISPEEDDLIIRMHSLLGNRWSLIAGRLPGRTDNEIKNYWNTHLSKKLRIQGTDPKTHQKIITDQAVPEKNKKKNKGMRKNNKQKSKHDHNNKTLVYLPKPIRVKALSCIPRTDSTLTLDSNSATTTASTSQDQKVQSPEAKKVNIIWGVGDDGDINGGIGIFFGEDHDLVNSSASYSDDVHTHHGTLEKLYEEYLQLLNVEDQKPDDHELDSFAQSLLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2676 288 MobiDBLite consensus disorder prediction 141 155 - -
Aed2g2676 288 MobiDBLite consensus disorder prediction 186 205 - -
Aed2g2676 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aed2g2676 288 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aed2g2676 288 CDD SANT 16 61 IPR001005 -
Aed2g2676 288 MobiDBLite consensus disorder prediction 130 160 - -
Aed2g2676 288 Gene3D - 71 116 - -
Aed2g2676 288 PANTHER MYB TRANSCRIPTION FACTOR 1 275 - -
Aed2g2676 288 Gene3D - 14 66 - -
Aed2g2676 288 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aed2g2676 288 SMART sant 66 114 IPR001005 -
Aed2g2676 288 SMART sant 13 63 IPR001005 -
Aed2g2676 288 CDD SANT 71 112 IPR001005 -
Aed2g2676 288 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aed2g2676 288 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 275 - -
Aed2g2676 288 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aed2g2676 288 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aed2g2676 288 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2676 Aed-Chr2 28875504 28877875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2676 4 129 MYB Transcription Factor Family AT3G13540 73.016 2.27e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aed2g2676 Myb_DNA-binding 7.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2676 K09422 - gmx:778044 392.119