Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2675 ATGGAGTATATGTTTGAAGATGATATGGGGGGTTTCCATGGTGCAGTAGAGGAAAAGGCGATGAGGAGCATACATATGGTTGAGGAAACAAAGAGAGAGGATGCTGTTAAAGCCATGGTGTACGAGGCGAGGGCAAGGCTTAGAGACCCAGTTTATGGCAGTGCTGGAGCTATTTACCAGTTACAGAAGATGATTGAGGAGTTGAAGGCGCAGCTGGAGTCCATAAAAACTCAGGTATCAGAACTGAGACAACAAAAAGATGATCACTTGTTAAGTAGTATTCGTAACAACAACCCAGCTCCCGTCAATGATCCTATCATCTTTGATGGTTTGTCGGCACAAGACTTCGATCATCCCATGGCTTCAGAATTCAGATCCATTTGA 384 0.4427 MEYMFEDDMGGFHGAVEEKAMRSIHMVEETKREDAVKAMVYEARARLRDPVYGSAGAIYQLQKMIEELKAQLESIKTQVSELRQQKDDHLLSSIRNNNPAPVNDPIIFDGLSAQDFDHPMASEFRSI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2675 127 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 21 118 - -
Aed2g2675 127 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1-LIKE 21 118 - -
Aed2g2675 127 Coils Coil 58 85 - -
Aed2g2675 127 ProSiteProfiles LOB domain profile. 1 79 IPR004883 -
Aed2g2675 127 Pfam Lateral organ boundaries (LOB) domain 19 76 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2675 Aed-Chr2 28871407 28872029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2675 21 96 AS2 family AT1G07900 46.053 3.88e-17 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aed2g2675 LOB 2.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2675 - - ccaj:109796546 129.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2675 2 28871407 28872029 Aed2g2675 2 28871407 28872029 ECH