Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2670 ATGGCACCTCTGGAAGAGAGTGGTCTCAGAAGCTCTCAGCCAGAAACAGGTGTGGGAGATGGCGATCTGTACACGCAACTATGGAAGCTATGTGCGGGACCTTTGGTGGATGTTCCTCGCCAAGGGGAGAGAGTTTTCTACTTCCCCCAGGGTCACATGGAACAATTGCAAGCTTCCACTAATCAGGAACTGACCCAGCAAATTCCTCATTTCAATCTCCCCCCCAAAAATTCTCTGCCGTGTTGTGCACATTCAGTTGCAGAACAAGAAACCGATGAAGTTTATGCTCGTATTACTTTGCTACCAGAATCCAATCAAGATGAGCCAACGAGTCCAGACCCAAGTCCACCCGAGACCCAGAAACAGAGTTTTTACTCTTTTAGTAAGATATTAACTGCTTCTGATACTAGCACTCATGGAGGATTTTCAGTTCTGCGGAGGCATGCTACCGAGTGTCTGCCTCAATTGGACATGACCCAAACTACCCCCAACCAGGAATTGGTAGCAAAGGATCTTCATGGGTTAGAGTGGAAGGGAGAGAATGGCGAACTGAGAGTCGGTGTTAGGTGTGTAGCCCGGCAGCAGAGTCCCATGCCTTCATCTGTGATATCAAGCCAGAGTATGCATCTTGGAGTGCTTGCCACTGCATCTCATGCATTTTTGACAAGTACCATGTTTGTGGTTTATTACAAACCTAGGACTAGCCAGTTTATTATTGGTCTAAACAAATATCTGGAAGCAGAAAACAATAAGTTTTCAGTTGGCATGCGTTTTAAAATGAGATTTGAGGTGGAGGACTCACCTGAAAGAAGGTTTTCTGGTACTATTGTTGGGGTTGGGGATGTATCTCCAGGATGGCAGAACTCTGTGTGGCGTTCATTGAAGGTTCAATGGGATGAACAGGCAATAATTCCAAGGCCAGAGAGGGTTTCTTCATGGGAGATAGAGCCTTTTGTTGCTTCCACTGCTTTGAATCTCACTCAACAAGTGGTGAAGAGCAAAAGGTCCAGGCCTGAGGTTTCATCTTCTGAAATTGGTCAAAATTCGCCTGCTCCAGCATTGTGGTATCATGGACCACATGACCCTACGGCATTAGGTGGCAGTGCAGAGGTGAAAAGCAATGAAAACCCAGTTGTATGGTCTACGCAGCAGAAAGAAATGAATGGCAATCCTATGAACAGCAGCAGCAGAGTCCGTGTGGAAGGAATGTGGGCTTCTTCCCCACATTCGGACCCTAAAAACAGCAAAGCTGTCACAGCACAATCATCTGTTTCATCTAGGCCGCATGATGTTTCGGCACATGATCCCATTGATTGTTGGTTATTTGGAGTTAATTTGACTAACAATTTTACTAATGTCCCGGATAAAGAACAACTGGGATGTCCAGCTATTATTCCTAGTGGTCCCAAAGATTCCATTCCTGTTGCTGCATGTGAAACTGAGGCTGCTCAGAATCCCAATAAGCCAATTATTTCTGATGGATCAGCCAGTGTCAGTGAGAGTGAGAGACACACCAAGCATGCCACTGTACTATCCACCAGGACTCGGACCAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGTGCAGTTGACCTTACCAGGTTAAAAGATTATGATGATCTCATAGATGAGCTTGAGAAAATGTTTGATATTAAGGGAGAGCTTCGAATGCAAACCAAGTGGGCTATTACATTTACTGATGATGAAAATGACATGATGCTCGTTGGTGATGATCCATGGCCGGAGTTCTGTACCATGGTGAAGAGGATTTTCATTTGTTCAAGGGAAGATGTGAAGAAGATGAAAGGCAAGCATTCTGCTTCTTCATCAGAGGGTGAAGAAACATTGTTGAGCCAAGATTCACAGAATAGGGAGGAGACTCAGCAAATCTCTTGCGATTTGACAGCTTAA 1911 0.4526 MAPLEESGLRSSQPETGVGDGDLYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQELTQQIPHFNLPPKNSLPCCAHSVAEQETDEVYARITLLPESNQDEPTSPDPSPPETQKQSFYSFSKILTASDTSTHGGFSVLRRHATECLPQLDMTQTTPNQELVAKDLHGLEWKGENGELRVGVRCVARQQSPMPSSVISSQSMHLGVLATASHAFLTSTMFVVYYKPRTSQFIIGLNKYLEAENNKFSVGMRFKMRFEVEDSPERRFSGTIVGVGDVSPGWQNSVWRSLKVQWDEQAIIPRPERVSSWEIEPFVASTALNLTQQVVKSKRSRPEVSSSEIGQNSPAPALWYHGPHDPTALGGSAEVKSNENPVVWSTQQKEMNGNPMNSSSRVRVEGMWASSPHSDPKNSKAVTAQSSVSSRPHDVSAHDPIDCWLFGVNLTNNFTNVPDKEQLGCPAIIPSGPKDSIPVAACETEAAQNPNKPIISDGSASVSESERHTKHATVLSTRTRTKVQMQGVAVGRAVDLTRLKDYDDLIDELEKMFDIKGELRMQTKWAITFTDDENDMMLVGDDPWPEFCTMVKRIFICSREDVKKMKGKHSASSSEGEETLLSQDSQNREETQQISCDLTA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2670 636 ProSiteProfiles PB1 domain profile. 514 595 IPR000270 GO:0005515
Aed2g2670 636 MobiDBLite consensus disorder prediction 385 430 - -
Aed2g2670 636 Pfam Auxin response factor 216 295 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aed2g2670 636 MobiDBLite consensus disorder prediction 334 373 - -
Aed2g2670 636 SUPERFAMILY CAD & PB1 domains 508 590 - -
Aed2g2670 636 Pfam AUX/IAA family 559 595 IPR033389 -
Aed2g2670 636 Pfam AUX/IAA family 502 550 IPR033389 -
Aed2g2670 636 MobiDBLite consensus disorder prediction 385 401 - -
Aed2g2670 636 MobiDBLite consensus disorder prediction 485 506 - -
Aed2g2670 636 Gene3D - 251 323 - -
Aed2g2670 636 MobiDBLite consensus disorder prediction 602 636 - -
Aed2g2670 636 MobiDBLite consensus disorder prediction 408 429 - -
Aed2g2670 636 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 178 609 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed2g2670 636 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 9 178 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aed2g2670 636 SUPERFAMILY DNA-binding pseudobarrel domain 118 219 IPR015300 -
Aed2g2670 636 MobiDBLite consensus disorder prediction 610 636 - -
Aed2g2670 636 Gene3D - 125 243 IPR015300 -
Aed2g2670 636 PANTHER AUXIN RESPONSE FACTOR 11 178 609 - -
Aed2g2670 636 PANTHER AUXIN RESPONSE FACTOR 11 9 178 - -
Aed2g2670 636 MobiDBLite consensus disorder prediction 334 349 - -
Aed2g2670 636 Gene3D - 510 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2670 Aed-Chr2 28849196 28853928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2670 19 601 B3 DNA Binding Superfamily AT4G23980 52.153 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2670 K14486 - gmx:100820503 972.615