Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2669 ATGGACCATCAACCTCCACCGTGCCCCAACGACGACGACCTAACAGCCTCCGCCGCCGTCTCAATGGACAATCCTCGGGGAGGCACGCGCCACCCCGTGTACCGTGGCGTCCGAAAGCGCCGCTGGGGCAAATGGGTCTCCGAAATCAGGGAGCCGCGGAAGAAGAACCGCATATGGTTGGGGTCGTTTCCGGTGCCGGAGATGGCGGCGCGAGCATACGACGTCGCAGCATACTGCCTCAAAGGCCGGAAGGCGCAGCTCAACTTTCCCGACGATGTCGACTCTCTGCCGCTTCCGTCGTCCCGCACGGCAAGAGACATTCAGGCCGCGGCGGCACAGGCGGCGCGAATGATGAAAGCTTCCGGTAATGATGAGAAAAGCAGCATTGCCTCCGACGACGGCGATGATTTTTGGGGCGAGATTGAGTTGCCGGAGCTCATGAACGGCGAGTGCTGCTGTGCCTCATCCTGGAATTCCTCCGGCGGCATCACCGAGTGGCCGGAGGAGTCGCAGCAACCGTGGTTCATGGCGTGTCTATGA 540 0.6185 MDHQPPPCPNDDDLTASAAVSMDNPRGGTRHPVYRGVRKRRWGKWVSEIREPRKKNRIWLGSFPVPEMAARAYDVAAYCLKGRKAQLNFPDDVDSLPLPSSRTARDIQAAAAQAARMMKASGNDEKSSIASDDGDDFWGEIELPELMNGECCCASSWNSSGGITEWPEESQQPWFMACL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2669 179 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 179 - -
Aed2g2669 179 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Aed2g2669 179 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
Aed2g2669 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 20 179 - -
Aed2g2669 179 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Aed2g2669 179 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Aed2g2669 179 PRINTS Ethylene responsive element binding protein signature 72 92 IPR001471 GO:0003700|GO:0006355
Aed2g2669 179 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Aed2g2669 179 SUPERFAMILY DNA-binding domain 33 92 IPR016177 GO:0003677
Aed2g2669 179 MobiDBLite consensus disorder prediction 1 33 - -
Aed2g2669 179 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2669 Aed-Chr2 28839067 28839606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2669 5 179 AP2-EREBP Transcription Factor Family AT1G01250 56.522 5.22e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed2g2669 AP2 1.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2669 K09286 - gmx:100819971 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2669 2 28839067 28839606 Aed2g0537 2 3888017 3888583 PCT