Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2668 ATGAAGGTGGTTGACACTGCCGTGTGGGATGACGAGGAGAAGGCCATGGTTGGGGCTGTTCTGGGCGGTCGAGCTTTAGAGTTTTTAATGAGAAACTCAGTGTCGAATGAGAGTGTTCTAATGGCAGTTGGGAGCGAGGAGGGGCTGCAGAACAAGCTCTCCGATCTGGTGGAGCGTCCCAACGTCTCCAATTTCAGTTGGAACTACGCTATTTTCTGGCAGCTCTCGCAGTCGAAATTCGGTGAGTGGGTTCTGGGTTGGGGAGATGGCTGCTGCAGGGAACCCAACGAGGAAGAAGAGGCCGCGCTCAGAGGAACACTGAGGCTTCTCCGCGTCGACGAGGAGATGCAGCAGAGGATGCGGAAGAGGGTGTTGCAGAAGTTGCATACCACCTTCGGGGGCTCCGATGAGGACAATTACGCTTTTGGCCTCGACAACGTGACCGACACCGAGATGTTCTTTCTTGCTTCCATGTACTTCTCTTTCCCTCGCGGCCATGGTGGCCCAGGTAAGTGTTTTGCGTCCGGGAACAATCTCTGGCTCAAATCTGTCTCTGATTATTGTGTGCGTTCTTCTTTGGCTAAATCTGCGGGAATTCAGACTATTGTTTTGGTTCCTACTGATTTGGGAGTGGTGGAGTTGGGTTCTGTGAGAATGTTACCCGAGAGTTTTCAAGTCTTGCAGGCTGTTAAATCTGTCTTCTCCACGCAGTCTCCTTCATACCAGGCGGTTTTTACTGGGGACGGTAAGAAGGTAGATGCAGGAGTTCCAATTCCCAAGGTTTTTGTCAACACAATTGATAGTAGAACACATTTCAGAGAGAAACTTGCTGTTAGAAAAATGGAGGATAATAGGCCTTGGGCAGGCGGCCATGCGCGGAGTAATGGTGTTCATGTTTCGAGTTGGGCCTCCACGAGCAGTGTGGTCGCAGAGCTGGCTAATGGTGCGAGACAGGATTTAAGGCTGAGCAATAGCAATAGCAATAGCTATCCACCTCAAAGGCAGGTGCAAATGCAAATTGACTTTACTGGAGCCACTTCCAGGCCTTCTTCTGTCAGGCCGGTTGTTGGTGGTGAATCTGAGCAACTTTCTGATGTTGAGGCCTCTTGCAAGGAGGAGCAACCAACGACGACCGATGAAAGGAAGCCCAGAAAGCGGGGCAGGAAGCCTGCTAATGGAAGGGAAGAGCCCCTCAATCATGTGGAGGCGGAGAGGCAAAGGCGCGAGAAGCTCAACCAGCGCTTCTATGCATTGAGATCTGTGGTGCCTAACATCTCCAAGATGGATAAGGCATCGTTGTTGGGAGACGCCATTGCTTATATCAACGAGCTTCAGGCTAAAGTCAAGCTCATGGAGGCTGAAAGAGAGATTTCTTCAAATGATGGATCGATTTTGGATGTGGATGTTCATGTTCAAGCTGTTCAAGACGAGGTCACTGTAAAGGTCAGCTGCCCTCTTCACAAGCACCCTGTTTCAAAAGTAATCCAAACATTCAATGAAGCACAAATGAGTGTTGTAGACTCTAAAATTGCTGCTGCAAATGATACTATTTTTCACACATTTGTAATTAAGTCCCAAGGATCTCAACAGCTCACAAAGGATAACTTGATTGCTGTTTTTTCTCCAACAGAATCCAACTCATTGTCGTCACTTAGATAG 1659 0.4895 MKVVDTAVWDDEEKAMVGAVLGGRALEFLMRNSVSNESVLMAVGSEEGLQNKLSDLVERPNVSNFSWNYAIFWQLSQSKFGEWVLGWGDGCCREPNEEEEAALRGTLRLLRVDEEMQQRMRKRVLQKLHTTFGGSDEDNYAFGLDNVTDTEMFFLASMYFSFPRGHGGPGKCFASGNNLWLKSVSDYCVRSSLAKSAGIQTIVLVPTDLGVVELGSVRMLPESFQVLQAVKSVFSTQSPSYQAVFTGDGKKVDAGVPIPKVFVNTIDSRTHFREKLAVRKMEDNRPWAGGHARSNGVHVSSWASTSSVVAELANGARQDLRLSNSNSNSYPPQRQVQMQIDFTGATSRPSSVRPVVGGESEQLSDVEASCKEEQPTTTDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAIAYINELQAKVKLMEAEREISSNDGSILDVDVHVQAVQDEVTVKVSCPLHKHPVSKVIQTFNEAQMSVVDSKIAAANDTIFHTFVIKSQGSQQLTKDNLIAVFSPTESNSLSSLR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2668 552 Gene3D - 388 460 IPR036638 GO:0046983
Aed2g2668 552 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 234 IPR025610 -
Aed2g2668 552 PANTHER MYC 254 542 IPR045084 GO:0003700|GO:0006355
Aed2g2668 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 395 444 IPR011598 GO:0046983
Aed2g2668 552 PANTHER MYC 5 244 IPR045084 GO:0003700|GO:0006355
Aed2g2668 552 SMART finulus 401 450 IPR011598 GO:0046983
Aed2g2668 552 Coils Coil 441 461 - -
Aed2g2668 552 CDD bHLH_AtAIB_like 392 457 - -
Aed2g2668 552 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 398 459 IPR036638 GO:0046983
Aed2g2668 552 MobiDBLite consensus disorder prediction 365 406 - -
Aed2g2668 552 Pfam Helix-loop-helix DNA-binding domain 399 445 IPR011598 GO:0046983
Aed2g2668 552 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 5 244 - -
Aed2g2668 552 PANTHER ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR 254 542 - -
Aed2g2668 552 MobiDBLite consensus disorder prediction 345 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2668 Aed-Chr2 28827448 28829106 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2668 8 550 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G01260 49.749 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aed2g2668 bHLH-MYC_N 6.1e-52 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2668 - - gmx:100801502 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2668 2 28827448 28829106 Aed2g0538 2 3902620 3904509 PCT