Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2666 ATGGAAGCGGAAACTCGACGGAAAGTGGAGGAGATGGTGTTGGATATACTGAAGAAATCCAACATTGAAGAAGCCACTGAGTTCTCCATCCGATTCGCTGCCTCGGAGCGTCTCGGCATCGACCTCTCCGACTCCGCCAGTAGACAGTTCGTGAGAAGCGTCGTTGAGTCTTATCTTCTCTCCGTGGCCAATGAAAAGTCCAAAGACGCAGAGAAGAAGATGAAGAAAGAGGAGGAAGATATTGCCGCCAAAAACGACGACGTAGCGAATAAGGAAGATGTCGTTGTTGCGCCCAACCAAGAGTCCAGAGAGACAGAGGTTCCCAAACTGAAGAGGGACGATCTCGAACGCGTTATTTGTCAACTGTCGAACAGGAGGAACGTGTCGGTTAAAGCTTTCAAAGGGACAACCCTGGTCTCAGTTAGGGAGTTCTATATGAAGGATGGAAAACTACTTCCCGGATGTAAAGGGATAAGTTTAACTTCTGAACAATGGTCGACCTTCAAGAAGAGTGTTCCTGCCATAGAGGAAGCTATCAAAAAGATGAATGGAAGGATAAGATCGGAGCCTAATGGTAAGGAAAATGGAGATGCGTCAAATTCGGTTGCTCCTCTTGAGCCTAATGGTAAGCAAAGTGGAGATGCATCAAATTCAGTTATTGATGTGGCTCCTCCTAAGCCTAATGATAAGCAAAATGGAGATATGGTTGATGAGAAAGCAGTTATTGAGCAAATCCAAGAATTAAATGGCATGGCAGATTCTATTGCTGCTGCTGGAATGTTTATTGATGACAACTTTCATGTTAGTGTCATCATTTCAAAGCTTCCAGCATCCTGGAAGGACTTCTGCATCAAGTTAATGCGTGAGGAGTATCTACCTTACCGGAAGTTAATGGAACGTATACAGATCGAGGAAGAATATCGCCATGGAGTAGTAAAACGAGTGGCTGAACATTCTAATGGTATGGGTATGGGATATCACCAGGCCTATAAAGGTGGAGGACATAGGAGGCCTGACTATAAGCCACTGGGAATGTGTAGGAATAGGCCAGAAATTAATGTTAATGCCAGGGGCGTACCCTGTAGTGTATGTGGCAAGAAGGGACATCTTTCTAAACATTGCTGGAGAAGAAATGACAGACAATTTAATGAGAGGAAATCAGAAGAGGATGTGCGTATACCTACAGAAGTTGATAATACTCCGGGTGCTAGTGCTACCCAGTAA 1224 0.4469 MEAETRRKVEEMVLDILKKSNIEEATEFSIRFAASERLGIDLSDSASRQFVRSVVESYLLSVANEKSKDAEKKMKKEEEDIAAKNDDVANKEDVVVAPNQESRETEVPKLKRDDLERVICQLSNRRNVSVKAFKGTTLVSVREFYMKDGKLLPGCKGISLTSEQWSTFKKSVPAIEEAIKKMNGRIRSEPNGKENGDASNSVAPLEPNGKQSGDASNSVIDVAPPKPNDKQNGDMVDEKAVIEQIQELNGMADSIAAAGMFIDDNFHVSVIISKLPASWKDFCIKLMREEYLPYRKLMERIQIEEEYRHGVVKRVAEHSNGMGMGYHQAYKGGGHRRPDYKPLGMCRNRPEINVNARGVPCSVCGKKGHLSKHCWRRNDRQFNERKSEEDVRIPTEVDNTPGASATQ 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2666 407 MobiDBLite consensus disorder prediction 383 407 - -
Aed2g2666 407 PANTHER PBF68 PROTEIN 235 397 - -
Aed2g2666 407 PANTHER PBF68 PROTEIN 1 189 - -
Aed2g2666 407 MobiDBLite consensus disorder prediction 183 234 - -
Aed2g2666 407 MobiDBLite consensus disorder prediction 193 218 - -
Aed2g2666 407 Pfam Transcriptional Coactivator p15 (PC4) 120 170 IPR003173 GO:0003677|GO:0006355
Aed2g2666 407 Gene3D Transcriptional Coactivator Pc4; Chain A 110 187 IPR009044 GO:0003677|GO:0006355
Aed2g2666 407 ProSiteProfiles Zinc finger CCHC-type profile. 361 374 IPR001878 GO:0003676|GO:0008270
Aed2g2666 407 Gene3D - 356 400 - -
Aed2g2666 407 PANTHER PBF68 PROTEIN 235 397 - -
Aed2g2666 407 Pfam DEK C terminal domain 5 59 IPR014876 -
Aed2g2666 407 PANTHER PBF68 PROTEIN 1 189 - -
Aed2g2666 407 SUPERFAMILY ssDNA-binding transcriptional regulator domain 119 181 IPR009044 GO:0003677|GO:0006355
Aed2g2666 407 Coils Coil 60 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2666 Aed-Chr2 28814392 28818015 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Aed2g2666 DEK_C 9.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2666 - - gmx:100818901 346.28