Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2658 ATGGAGCAGAAGATGTACAACCTGTTCGTGAAGCACTTGGACGGGAAAACCCTAACCCTCCTATACCCCTCTCCGATCCTCTACGCGAGTTCCATCAAGGATCGCCTCTTCCAACTCACCGGAATCCCCGCCCAGCACCAGCGCCTCGTCACCGGCTTCCGACACCTCAACGACGACTTCTCCGCCATCCAATGCCTCCCGGCGGACGGCAACATGTTCCCCTCCGTGCGCATCCTTCTTCGCCTCAAGGGCGGCAAGGGAGGCTTCGGCTCTCTTCTCCGCGGCGCCGCCACCAAGGCCGGCCAGAAGAAGACCAACAACTTCGACGCCTGCCGCGACATGAGTGGGCGGAGGCTGAGGCACGTCAACGCCGAGAAGAGGCTGGAGGAGTGGAAGGCTGGTGAAGACGAGAGGAAGCTCGAGAAGGTCGCCGAGGAGTTTCTGAAGAAGCAGATGAAGAAGGGAAAGGGTAAGGGTAAGGGTGAAGCTGATGGAGAAGCCCACAAGTATGTTGCTAAATATAGGGAGCAGTCTGAACGTTGTGTTGCCGATGTTGCCTTGTCCGTTAAGGAGGCTCTCGCTGCCAAGCGCAAGAGCCCTTCACAACCCCCCAACCGTGATGCCAAGAAGTTGAAGATATGGATGGGGAAGAGGAAATTGAATGAAAGTGACAGTGATTACAGTGATGATTCTGGTGATGAGGGGGAGATGGAGAAATCGGATTTATTGAATGGGCTGAATGAGTCGGGCCTAAATAAGGCTGAGGGCAGTTTGGGTTCGGTAAATGGGGGTGGAGGCTCTTCTGGTGTCATCTCGTGTGAAAGTGGGTCTGAAGAAGAGAAGGAAACTGTTGTAGAAGGAAATGTGGGATCTCTTGGGTTGCTGAGTGATGAAAGTATTCAGGGTGCGGCTGTGGCTGAGCCTGTGATAGTGCCAAAGGAGTCTGTGGTCGCTGGACTTAACACTGAAGATAATGCATATATGGATTGCCATGGAGGCATGTCTGACAAGTTCGAGGGTGCTGTGAATCAGGCCTCAAATACTAACAGCTCTGAAGCTGTGGTCAGCACTGGAGAACCGAATGATATGGAAATTGAAGGTTCTCTCGAGCATAAAGCAGTAGTCAATCAAGAAAGCTCGCCAAGCACTAGTGTTCCCGCGTTGGAGGAGCCCCTGAATTTTGATGCCTTTAATTCAGCTGCTGAACTTGAGGATCTTGGCTTGGAAAGGTTGAAGTCTGAACTACAGTCATGCGGATTAAAATGTGGAGGTACTTTGCAAGAGCGTGCTGCCAGGCTCTTTCTTTTAAAATCGACTCCCCTGGATAAACTTCCAAAAAAGCTGCTTGCAAAGAAGTGA 1359 0.5202 MEQKMYNLFVKHLDGKTLTLLYPSPILYASSIKDRLFQLTGIPAQHQRLVTGFRHLNDDFSAIQCLPADGNMFPSVRILLRLKGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAGEDERKLEKVAEEFLKKQMKKGKGKGKGEADGEAHKYVAKYREQSERCVADVALSVKEALAAKRKSPSQPPNRDAKKLKIWMGKRKLNESDSDYSDDSGDEGEMEKSDLLNGLNESGLNKAEGSLGSVNGGGGSSGVISCESGSEEEKETVVEGNVGSLGLLSDESIQGAAVAEPVIVPKESVVAGLNTEDNAYMDCHGGMSDKFEGAVNQASNTNSSEAVVSTGEPNDMEIEGSLEHKAVVNQESSPSTSVPALEEPLNFDAFNSAAELEDLGLERLKSELQSCGLKCGGTLQERAARLFLLKSTPLDKLPKKLLAKK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2658 452 MobiDBLite consensus disorder prediction 194 282 - -
Aed2g2658 452 MobiDBLite consensus disorder prediction 202 226 - -
Aed2g2658 452 PANTHER SPLICING FACTOR SF3A-RELATED 5 451 - -
Aed2g2658 452 MobiDBLite consensus disorder prediction 245 274 - -
Aed2g2658 452 Pfam Silencing defective 2 N-terminal ubiquitin domain 7 153 IPR024974 -
Aed2g2658 452 PANTHER REPLICATION STRESS RESPONSE REGULATOR SDE2 5 451 - -
Aed2g2658 452 Gene3D - 1 85 - -
Aed2g2658 452 SUPERFAMILY Ubiquitin-like 3 63 IPR029071 -
Aed2g2658 452 Pfam Replication stress response SDE2 C-terminal 380 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2658 Aed-Chr2 28769186 28772380 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2658 385 451 C2H2 Transcription Factor Family AT5G06160 47.761 4.50e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2658 K25059 - gmx:100781694 612.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2658 2 28769186 28772380 Aed2g2658 2 28769186 28772380 ECH