Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2657 ATGAATTCAAAGGGACGTAAATTTGTGAGGTTTGAGGACTGGAAATCAGAGTCATCTTATAGTGCAGAGCAAGAAGATTCAATTATTAACAATGGGAATCACAAAAGAAGACCAAGTGTGGGTGCGGTTTTGAAGAGTATAGGAAGAAGGCTGGAGAGTGGGTCAGAGAAGATGAAGAATTTGAGAAGAGCCTCAACTGTGCATCCTTTAAGTGTAAGTGTAAGTGATGGACAGAAAAAGATGCCACCAGGGAAGAAAATTCTTGATCCACAGGGTCCACTCCTTCAGAAATGGAACAAAATCTTTGTAGTAACGTGTGTGCTGGCAGTCTCCGTGGACCCGCTCTTCTTTTACATTCCAGTGATTAATATTCCTGATACATGCCTTGAATTGAATGTAACATTGCAAATCATTGCCAGTGTTCTTCGCACCTTCTTTGATCTCTTCTACATTCTACGCATAATCTTTCAGTTTAAGACAGGCTTCATTGCCCCTTCTTCTCGTGTTTTTGGAAGGGGTGAGCTCATTAATGATCCTGTGGCTATAATGAAGAGATACTTAACTTCATACTTCATCATTGATATTCTATCAATTATTCCAGTTCCACAGGTGGTTGGAGCTATCTGGTACTTGCTTTCAGTAGAGTCAGAGCTTCGGTGCTGGGGCAGAGAGTTAAATAATGCTACACTCTTACGTTGTATAGAACACCGTGATCCTGAAGTCCTTACAAGGCTCAACGACTCTTGTTCTTTGGTTGATCCTGATACAATCACTGACTCAATCACCTTCAATTTTGGAATATTTTTCGATGCTCTAGTTTCAGGTGTGGTAAAATCATCAACAGATTTTCCTCACAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTGTTGGACAAAATCTCAAGACTAGTACTTACCTCTCAGAAATAGTCTTTGCAATCTTCATTGCCATATTTGGATTGGTCTTATTCTCGTTACTTATTGGAAACATGCAGAAATATCTGCAATCTACAACTGTTAGAGTGGAGGAGATGAGAGTGAAGAGACAGGACGCAGAACAGTGGATGTCGCACCGTATGCTACCTGAGAACTTGAAGGAAAGAATTAGAAAGTACGAACAGTACCAATGGCAAGAAAATAGGGGTGTTGAGGAAGAGGCATTAATTCGTAACCTTCCTAAAGATCTCAGAAGGGACATAAAGCGTCACCTTTGCTTAACTTTAGTTAAAAAAGTGCCATTGTTTGAGAAAATGGATGAGCAGTTGTTGGATGCAATGTGCGATAGACTGAAGCCAGTCCTTTATACTGAGAGGAGCTACATTGGTCGTGAAGGAGATCCAGTTGATGAGATGCTTTTCATTATGCGTGGAAAGGTATCTACTGTGACAACAAATGGTGGAAGAACTGGTTTCTTCAATTCCATGTTACTCATGGCTGGTGACTTTTGTGGAGAGGAGCTTCTCACATGGGCTTTGGATCCCAACTCCTCCTCAAATCTACCCATTTCAACCAGGACTGTAGAAACCATATCTGAAGTTGAAGCCTTTGCACTCATGGCTGATGACTTGAAGTTCTATTCCCCACAGTGGAAGACATGGGCTGCCTGTTTCATACAAGCAGCTTGGCGTCGATACTGGAAAAAGAAGGTTGATAGGTCATTGTACGAAGCAGAAGACAAGCTACAAGATGCTTTGGAAAATGAGGAAGGCTCTTCTCTAAGCCTTGCTGCAACCATATACGCATCAAGGTTTGCTTCCAATGCACTGAGAAACTTGAGACAAAATAGCCGACACAATAGAATGCAACCGAGACTACTACCTCTGTTACCTCCAAAGCCAGCTGAGCCAGATTTCACTTCTCAGAAATAG 1881 0.4168 MNSKGRKFVRFEDWKSESSYSAEQEDSIINNGNHKRRPSVGAVLKSIGRRLESGSEKMKNLRRASTVHPLSVSVSDGQKKMPPGKKILDPQGPLLQKWNKIFVVTCVLAVSVDPLFFYIPVINIPDTCLELNVTLQIIASVLRTFFDLFYILRIIFQFKTGFIAPSSRVFGRGELINDPVAIMKRYLTSYFIIDILSIIPVPQVVGAIWYLLSVESELRCWGRELNNATLLRCIEHRDPEVLTRLNDSCSLVDPDTITDSITFNFGIFFDALVSGVVKSSTDFPHKFFYCFWWGLRNLSSVGQNLKTSTYLSEIVFAIFIAIFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRQDAEQWMSHRMLPENLKERIRKYEQYQWQENRGVEEEALIRNLPKDLRRDIKRHLCLTLVKKVPLFEKMDEQLLDAMCDRLKPVLYTERSYIGREGDPVDEMLFIMRGKVSTVTTNGGRTGFFNSMLLMAGDFCGEELLTWALDPNSSSNLPISTRTVETISEVEAFALMADDLKFYSPQWKTWAACFIQAAWRRYWKKKVDRSLYEAEDKLQDALENEEGSSLSLAATIYASRFASNALRNLRQNSRHNRMQPRLLPLLPPKPAEPDFTSQK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2657 626 ProSiteProfiles cAMP/cGMP binding motif profile. 418 502 IPR000595 -
Aed2g2657 626 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 205 - -
Aed2g2657 626 SUPERFAMILY Voltage-gated potassium channels 89 340 - -
Aed2g2657 626 Gene3D - 101 342 - -
Aed2g2657 626 Pfam Ion transport protein 98 346 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aed2g2657 626 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 204 625 - -
Aed2g2657 626 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 204 625 - -
Aed2g2657 626 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 205 - -
Aed2g2657 626 MobiDBLite consensus disorder prediction 15 34 - -
Aed2g2657 626 CDD CAP_ED 418 527 IPR000595 -
Aed2g2657 626 Gene3D Jelly Rolls 416 535 IPR014710 -
Aed2g2657 626 SMART cnmp_10 418 549 IPR000595 -
Aed2g2657 626 SUPERFAMILY cAMP-binding domain-like 347 548 IPR018490 -
Aed2g2657 626 Coils Coil 551 571 - -
Aed2g2657 626 Gene3D Helix hairpin bin 345 409 - -
Aed2g2657 626 MobiDBLite consensus disorder prediction 604 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2657 Aed-Chr2 28758314 28767978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2657 9 623 Ion Channels AT4G01010 51.872 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2657 K05391 - zju:107423657 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2657 2 28758314 28767978 Aed2g0552 2 3994179 3998798 PCT