Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g2652 ATGGAAGAGAGCAACAAGAGGAAACACACTAGTCTGATCCATGAATTAATCCAAGGAAAGGAGCTAACAAAGCAGCTCAGTAACCATCTGGTTTCTTCTTCTCCATCATCCCATGAAGAAATAGAAACCAATGAATTGTTGGTTGAGAAAATACTTTTGTCCTATGAGAAAGCACTCACCATGCTTAACTGGGGGGGTTCTATTGTGGGAGAGACCAGTGGGAGCCCCAGAAGTGAGGTCGTGGACCGTGAATTTCAGCACAAAGCTGTCTTCAAGAAAAGAAAGACCATGCCCAGATGGACGGAGCAAGTGAAGATTTGCTCAAGAGCAGGACTCGAAGGGTCTTTGGATGATGGATATAGCTGGAGAAAATATGGCCAAAAGGATATTCTTGGATCTAAGTTTCCAAGAGGATATTACAGATGCACACATAGACATGGACAAGGGTGTCTGGCAACAAAACAAGTTCAAAGGTCAGATGAAGACCCAACAACAATTGAGGTGACCTACAGAGGAAGACACACATGCACACAAGCTAAGCATTTAAACAAGACGGGTTTGGGGGGGAATCAATTCCACAATGATCAAAAGAATCAACCACTTCAAGAGAAAATTTTGCAACAACAAACCCCAGAGGGGATTTTCACCTTTGAAACCGAGCTTAAAGTCAAAACTGAGGAATTGGAAACCAAGGAGGATATTTTCACAGGGTTTTCCTTTCCTTCTCCATCAATTGGATCAGAAAACGAGGACAACAATAATATGGTACCCGAGACCATGATTGAAAACCATTTCATGGAATGCTTTTCTCCTGTATTCATATCACCAGTGACTTCAGAATCAAACCCTTTCTATTTGTCAGCATACCAGTTGGACAACGCTGGACTATTATGCCAAAACATACAAACCTCAGAATCTGATATCACTGAGATAGTTTCAGCCCCAACTTCAGTCACCAACTCCCCAATCCTTGATTTGGATATCTTGCGTCATGAAGGGGATTTTGACACGGATTTCCCTTTCATCACCCCTGAAATTTTCTCTTCATAA 1050 0.421 MEESNKRKHTSLIHELIQGKELTKQLSNHLVSSSPSSHEEIETNELLVEKILLSYEKALTMLNWGGSIVGETSGSPRSEVVDREFQHKAVFKKRKTMPRWTEQVKICSRAGLEGSLDDGYSWRKYGQKDILGSKFPRGYYRCTHRHGQGCLATKQVQRSDEDPTTIEVTYRGRHTCTQAKHLNKTGLGGNQFHNDQKNQPLQEKILQQQTPEGIFTFETELKVKTEELETKEDIFTGFSFPSPSIGSENEDNNNMVPETMIENHFMECFSPVFISPVTSESNPFYLSAYQLDNAGLLCQNIQTSESDITEIVSAPTSVTNSPILDLDILRHEGDFDTDFPFITPEIFSS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g2652 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 342 IPR044810 GO:0003700
Aed2g2652 349 Gene3D WRKY domain 103 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2652 349 ProSiteProfiles WRKY domain profile. 111 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2652 349 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 342 - -
Aed2g2652 349 SUPERFAMILY WRKY DNA-binding domain 115 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed2g2652 349 SMART WRKY_cls 116 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed2g2652 349 Pfam WRKY DNA -binding domain 117 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g2652 Aed-Chr2 28729743 28732865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g2652 16 185 WRKY Transcription Factor Family AT5G24110 49.419 1.17e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed2g2652 WRKY 4.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g2652 - - gmx:100127387 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2652 2 28729743 28732865 Aed2g0566 2 4104319 4107114 PCT